Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001578285.1_202016-03-
02] 479 sequences; 11,566,949 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq457 100 2e-16
seq435 93.3 3e-14
seq445 87.8 1e-12
>seq457
Length=55598
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612
|| ||||||||||| ||||| |||||||| || || || |||||| | ||| || ||
Sbjct 46970 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 46911
Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672
|| ||| | | | | || || ||||| || || ||||| | || ||
Sbjct 46910 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 46851
Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732
|| || ||| | || | ||| ||||| || |||| || | | ||| || | ||||||
Sbjct 46850 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTAC 46791
Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782
||||| |||||||| ||||| | ||| |||| ||||||||| |||| ||
Sbjct 46790 AACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 46741
>seq435
Length=67081
Score = 93.3 bits (102), Expect = 3e-14
Identities = 152/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 107564 TTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGCGATACTGT 107623
||||||||| ||||| || || || ||||| || | ||| || || || ||| |
Sbjct 30834 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 30893
Query 107624 CGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAGCAGAGACT 107683
| | | || || ||||||| || || ||||| | || || || || ||| |
Sbjct 30894 TGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATT 30953
Query 107684 TATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAACATTCAAAA 107743
|| | ||| ||||| || |||| |||| | ||| || | |||||||||||||||||
Sbjct 30954 GATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAA 31013
Query 107744 GGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782
|| || || |||||| | || ||||||||| |||| ||
Sbjct 31014 AGAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGG 31052
>seq445
Length=60744
Score = 87.8 bits (96), Expect = 1e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||| ||||| ||||| ||||| || || |||||||| || | ||| || || |
Sbjct 30452 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 30511
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
||||| ||| | | || || || ||| || || ||||| | || |||||
Sbjct 30512 GATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAA 30571
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
|| ||| | || | ||| ||||| ||||| || |||| | ||| || | || ||||||
Sbjct 30572 CAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAAC 30631
Query 107736 ATTCAAAAGGAGTCTACGTTGCA 107758
||||| |||||||| || || ||
Sbjct 30632 ATTCAGAAGGAGTCCACCTTACA 30654
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||| || ||||| || ||||| || || |||||||| || | || || | |
Sbjct 30680 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 30739
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
|| || ||| | || || || || || || ||||| | || ||||||
Sbjct 30740 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCGGATCAA 30799
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||||| | || | ||| ||||| ||||| || || | | ||| || | |||||||||
Sbjct 30800 CAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGATGGTAGAACCTTGTCTGACTACAAC 30859
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782
|| |||||||| ||||| | ||| ||||||||||| || |||| ||
Sbjct 30860 ATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGACTGAGAGGTGG 30906
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||||||||||||||| || | ||||| || || || ||| | || || ||
Sbjct 30908 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 30967
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
|| ||| | | | | || || || ||| || || ||||| | || || |||
Sbjct 30968 GACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 31027
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
|| ||| | |||| ||| ||||| || || || || | | ||| || ||||||||||
Sbjct 31028 CAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAAT 31087
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAAA 107785
|||||||||||||| || | ||| | || ||||| ||| | || || ||
Sbjct 31088 ATTCAAAAGGAGTCCACTCTTCACCTTGTCTTGAGGTTGAGGGGTGGTAA 31137
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398874471432031
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |