Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001578285.1_202016-03- 02] 479 sequences; 11,566,949 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq435 107 3e-18 seq445 87.8 3e-12 >seq435 Length=67081 Score = 107 bits (118), Expect = 3e-18 Identities = 152/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 146046 AAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACGATACTATTCAAAAT 146105 || || || || || || || || ||| | || || ||| | || |||||| | ||| Sbjct 30841 AAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATTGACAAT 30900 Query 146106 GTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTT 146165 || || || || ||| || ||||| || ||||| || ||||||||| | || ||| Sbjct 30901 GTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCTTT 30960 Query 146166 GCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCG 146225 || ||||| ||||| || || |||||| || | || || || || ||||||||||| Sbjct 30961 GCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAAGAATCC 31020 Query 146226 ACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 ||| | || ||||| || |||| ||||| |||| Sbjct 31021 ACTTTGCACTTAGTCTTGAGATTGAGAGGTGGTA 31054 >seq445 Length=60744 Score = 87.8 bits (96), Expect = 3e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | || || || || || ||||| || || | || || ||| | || Sbjct 30453 TGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCCG 30512 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || | || || || ||||| ||| || ||||| || || || ||||||| Sbjct 30513 ATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAAC 30572 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||| | || ||||| ||||| || |||| || ||||||| | | ||||| || | Sbjct 30573 AAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAACA 30632 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | || || || || || | ||| | || || | ||||||| |||| Sbjct 30633 TTCAGAAGGAGTCCACCTTACATCTTGTGCTAAGGCTAAGAGGTGGTA 30680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786161692828680