Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001578295.1_202016-03- 02] 890 sequences; 11,613,512 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq468 154 1e-32 >seq468 Length=42372 Score = 154 bits (170), Expect = 1e-32 Identities = 517/791 (65%), Gaps = 39/791 (5%) Strand=Plus/Minus Query 12908 AACGAAATATTTTCCATAAAATCGAAAGGATTTTTCGAACAA-TAGTATTTTTTACACCC 12966 || || || |||||||| |||||||| || |||| ||| | |||||||| || || Sbjct 38813 AAGGAGATGTTTTCCATGAAATCGAAGGGGTTTT-CGACCTTGTAGTATTTCTTGTTACC 38755 Query 12967 TAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTT 13026 || | | |||| |||||| || || ||||| | ||| || |||||||| ||| ||| Sbjct 38754 GAAAGCAACCAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGTCAGCGTT 38695 Query 13027 CATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAGt---ttttttCTATATCAAC 13083 ||| |||| || || || | || || || |||| ||| ||| || || || Sbjct 38694 CATACCTAGCAAAGCAACTGGTAAGGCGTCC---AAGAAGTATCTTTGTTCAATTTCCAC 38638 Query 13084 TGCTTCGATAACTATGTCTCTTATTACGTTCTCTAATGGAGGATTTGAT----AGATGCT 13139 || ||| | || || | | | | || | || || |||| | | ||| Sbjct 38637 AGCCTCGGTGACAATTTTT-TCA--ACAATGGCTGGGTCTGG-TTTGTTCTTCAAATGGG 38582 Query 13140 TAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTG 13199 |||| || |||||||| || |||||| ||||| ||||||| || | ||||| | Sbjct 38581 CGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGG 38522 Query 13200 AAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAAC 13259 |||| |||| ||| ||||| | |||| ||||| | ||| || || | ||||| |||| Sbjct 38521 AAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAAC 38462 Query 13260 CCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTAT 13319 | || ||||| | ||||||| | ||||| || | | ||||||||| || | Sbjct 38461 CGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACA-AGGCG 38403 Query 13320 TTTTACTCTCTA-TCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTC----AT 13374 | ||| | |||| || ||||| | || || | || | ||| || Sbjct 38402 TCAGCGTCTTGAATCCATCTTAAAGCCCATTCGGCCTTCTC----ACCGATTTCTGGGAT 38347 Query 13375 ATTTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTAT 13434 | | || || || || || | | |||| ||| ||| || |||||||| || Sbjct 38346 GGTGTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAAGTATCGAT 38287 Query 13435 CAATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACA 13494 ||| ||| || |||| || ||||||||||| ||| ||||||||||| || |||| Sbjct 38286 CAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACT 38227 Query 13495 TCTAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTAT 13554 | ||||||| | || ||||||| | | || |||| | |||||||| ||||| || Sbjct 38226 CTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAAT 38167 Query 13555 CCCGTCACTAGCAGCaaaaaaaGCAAG---TATGTGCTTAATAAAt---tttttttCGTT 13608 |||||| ||| || ||||| ||||| | || | | |||| | |||||||| Sbjct 38166 ACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTTTCGTT 38107 Query 13609 --TTCTGACAACTTTAACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTC 13666 ||||| || ||| || | | ||| || || ||||| | || ||| ||||| Sbjct 38106 CATTCTG-----TTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTC 38052 Query 13667 CAAAAAGAAGC 13677 || |||||||| Sbjct 38051 CAGAAAGAAGC 38041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430977725187780