Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001578295.1_202016-03- 02] 890 sequences; 11,613,512 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq468 100 3e-16 seq27 98.7 1e-15 >seq468 Length=42372 Score = 100 bits (110), Expect = 3e-16 Identities = 509/799 (64%), Gaps = 23/799 (3%) Strand=Plus/Minus Query 132642 TTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTT---GGCTGTGTTGTAGTG 132698 || ||| ||||||| ||| ||| ||||| |||||||| | | ||| ||| | Sbjct 38823 TTGTCCGGCCAAGGAGATGTTTTCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTT 38764 Query 132699 CTTGGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACAT 132758 |||| | |||| || | || | ||| |||||||| |||||||| | |||||| ||| Sbjct 38763 CTTGTTACCGAA-AG--CAACCAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCAT 38707 Query 132759 GGTTTCGCAATTAAGTCCCAGCAGACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTC 132818 || || | || |||| | || || | || || || | | ||| || Sbjct 38706 TAAGTCAGCGTTCATACCTAGCAAAGCAACTGGTAAGGCGTCCAAGAAGTATCTTTGTTC 38647 Query 132819 GATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCG-CTCGGCCGTTGCACCA 132877 || | || || |||||||| |||| ||| || | | || | ||| | || Sbjct 38646 AATTTCCACAGCCTCGGTGACAATTTTTTCAACAATGGCTGGGTCTGGTTTGTT-CTTCA 38588 Query 132878 AATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTT 132937 |||| ||||| |||||| ||||||||| ||||| || ||||| || | || | || Sbjct 38587 AATGGGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATT 38528 Query 132938 CGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGA 132997 ||||| || || || |||||||| | || | ||||| | ||| || |||| ||| | Sbjct 38527 CGTTGGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAA 38468 Query 132998 AACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACG 133057 | || || || ||||| || || | || || || || || || | || || ||| Sbjct 38467 AGGAACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACA 38408 Query 133058 TGGCTTCTTTG-CTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGC 133116 ||| || | || | ||||| | | |||||||||||||| || || || Sbjct 38407 AGGCGTCAGCGTCTTGA-ATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCTGGG 38349 Query 133117 ATCGTTTCGATGGCGTTCAACAAACGGAGTT---TCTCTTCCGAGGAACGCACGTAGGTG 133173 || || | ||||| || ||||| || || | |||| | | | ||| || Sbjct 38348 ATGGTGTGAATGGCATTGAACAA---GAATTCACTTTCTTTAGGGTCCTTGATGTAAGTA 38292 Query 133174 TCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAA 133233 ||||| | || || |||| ||||| | || || || |||||| || ||||| Sbjct 38291 TCGATCAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAG 38232 Query 133234 AAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTG 133293 || | | ||||| | || ||||| | ||| || |||| ||||| || Sbjct 38231 AAACTCTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTA 38172 Query 133294 ACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTG--ATGAAATGGCGCTCGT 133351 || || ||||| |||||||||||||| || || || | |||||| | ||||| Sbjct 38171 ACAATACCGTCAGAAGCGGCGAAAAAGGCAAGAAC--TCTGGAAATGAAAAATCTCTCGT 38114 Query 133352 TGTCGTTCA---AGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGG 133408 | ||||||| | | |||||| | | ||||| |||| || | || || ||| Sbjct 38113 TTTCGTTCATTCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGG 38054 Query 133409 TCCAAAACGACGCCTCGGC 133427 |||| || || || ||||| Sbjct 38053 TCCAGAAAGAAGCTTCGGC 38035 >seq27 Length=27770 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || | || || ||||||||||| | || || || || || Sbjct 342 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 283 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| |||| ||||||| ||||| || || || || | || || Sbjct 282 GACACGATCGATAACG-TTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCA 224 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||| || | || | || || || ||||| || |||| | ||| | |||||||| Sbjct 223 ACAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAA 164 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||||| | || || || |||||| || | |||||||| || Sbjct 163 CATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500167235577600