Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001578295.1_202016-03- 02] 890 sequences; 11,613,512 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq468 127 2e-24 >seq468 Length=42372 Score = 127 bits (140), Expect = 2e-24 Identities = 375/575 (65%), Gaps = 11/575 (2%) Strand=Plus/Minus Query 23500 AACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAA 23559 ||||| || |||||||| || || | ||||| || |||| |||||||| || ||| Sbjct 38579 AACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAA 38520 Query 23560 AATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCG 23619 || ||||| || ||||| | |||| ||||| | ||| || || | ||||| || ||| Sbjct 38519 AAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCG 38460 Query 23620 GAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTA 23679 || || || | ||| |||| | |||||||| || || | | |||||| || | | Sbjct 38459 GAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCGTCA 38400 Query 23680 TAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCA----ATTGT 23735 || ||||||| || | ||| | |||||| | || | | || || Sbjct 38399 GCGTCTTGAATCCATCTTAAAGCCCATTCGGCCTTC----TCACCGATTTCTGGGATGGT 38344 Query 23736 TTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAG 23795 | ||| || || || | || |||||| | || | || || ||||| || | Sbjct 38343 GTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAAGTATCGATCAA 38284 Query 23796 TAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCT 23855 || || ||||||| |||||||||||||| || || || || || |||| | Sbjct 38283 CAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTCTT 38224 Query 23856 AGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACC 23915 || || | | ||| || || | | || ||| | | || ||||| ||||||||||| Sbjct 38223 TGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATACC 38164 Query 23916 ATCACTAGCAGCAAAGAAAGCAAGAACATATTTTAT--AAAATGTCTTTCATCAGTTGAT 23973 ||| ||| || || || |||||||| || ||||| ||| | ||| || Sbjct 38163 GTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTTTCGTTCAT 38104 Query 23974 AAT-TTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACT 24032 | || ||||| |||| ||||| || || ||||||| ||| ||| | ||||| ||| Sbjct 38103 TCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAAGA 38044 Query 24033 TGCCAAGGCACGCTTATACATTAGCCAAATATCAT 24067 || ||||||||| || | |||| || |||| Sbjct 38043 AGCTTCGGCACGCTTGTAGGCTTGCCAGATTTCAT 38009 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521482198446000