Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001578385.1_202016-03- 02] 3,038 sequences; 10,012,846 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq2609 86.0 9e-12 >seq2609 Length=10622 Score = 86.0 bits (94), Expect = 9e-12 Identities = 308/474 (65%), Gaps = 12/474 (3%) Strand=Plus/Minus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||| || |||||| | || || || | ||| | ||| ||||||| ||||| || || Sbjct 9487 CAGGGTGGTAATAAAAGACCTGGTGCGTTTGCCCTTTACCTGGAACCATGGCATGCTGAT 9428 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCA---CGAGCCAGG 96992 | ||||| ||||| || || | || ||| || | |||||| | || || || Sbjct 9427 ATATTTGATTTTATTGATATTAGGAAGAACCACGG---TAAAGAGGAAATTCGTGCAAGA 9371 Query 96993 GACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGC 97052 || ||||| ||| || ||| | || ||| | ||||||||||| ||| | || ||| Sbjct 9370 GATTTGTTCCCTGCTCTATGGATTCCTGATCTTTTCATGAAGCGTGTCGAAGAAAATGGG 9311 Query 97053 TACTGGAGCCTAATGTGCCCCGAC-TCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGA 97111 ||||| | | || | || || || | || ||| | |||||| | || || || Sbjct 9310 ACCTGGA-CATTATTCTCTCCAACATCAGCTCCTGGTTTAAGCGATTGTTACGGTGACGA 9252 Query 97112 GTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGACGAGTCGATGC 97171 ||||||||| || || ||||||| |||| || || || |||| | || | || Sbjct 9251 GTTTGAGGCTCTATATACCCGCTACGAGAAAGAAGGTCG--TGGTAAGACTA-TCAAAGC 9195 Query 97172 ACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCT 97231 | | || | ||| | |||| || ||||| || ||||| || || | | || | Sbjct 9194 CCAAAAATTATGGTATTCCATTTTGGAAGCTCAAACTGAAACTGGTACACCTTTCGTTGT 9135 Query 97232 CTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTC 97291 ||||||||| | || | | || || ||| |||| || ||||||| || Sbjct 9134 TTACAAGGAT-GCTTGTAACAGAAATCTAATCAAAAAAACTTAGGTGTCATCAAGTCATC 9076 Query 97292 CAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTG 97345 || | ||| |||||||| || ||| | |||| || || || || ||||| Sbjct 9075 AAACTTATGCTGTGAAATTGTTGAATACTCAGCTCCAGATGAAACTGCTGTTTG 9022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741031058276880