Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001578385.1_202016-03- 02] 3,038 sequences; 10,012,846 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq2730 116 3e-21 seq1671 102 7e-17 >seq2730 Length=4271 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| || ||| | || || || | || ||| | || || || | Sbjct 3926 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 3985 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| ||||| | || || || ||| ||||| ||||| || ||||| |||||| Sbjct 3986 GACACTATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 4045 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || ||| |||||| | || |||||||| ||||| | |||| | ||||||||| Sbjct 4046 CAAAGATTGATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAAC 4105 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| ||||| ||||| | ||||| ||||| ||||||||||| || Sbjct 4106 ATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGG 4152 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || || || || ||| | || || | || || || || | Sbjct 3698 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 3757 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| ||||| | || || || || ||||| ||||| || ||||| |||||| Sbjct 3758 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCGGATCAA 3817 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| |||| | | ||| ||||| || ||||||| |||| | | || || ||| Sbjct 3818 CAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGATGGTAGAACCTTGTCTGACTACAAC 3877 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || ||||| |||||||| |||| || ||||| ||| ||||||| || Sbjct 3878 ATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGACTGAGAGGTGG 3924 >seq1671 Length=1351 Score = 102 bits (112), Expect = 7e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 ||| |||||| | || || || || ||||| || || | |||||| | ||||| || | Sbjct 152 CAAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATC 211 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 ||||| || || | ||||| ||||| ||||| ||||| || || || || Sbjct 212 TTCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGA 271 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166 ||||| ||| |||| | | || |||||| | ||||||| |||| | ||| || Sbjct 272 CCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTA 331 Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| ||||| |||||||| | || || || || ||||||||||| || Sbjct 332 CAACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429920081350890