Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001578385.1_202016-03-
02] 3,038 sequences; 10,012,846 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq1671 174 4e-38
seq1903 158 3e-33
seq2730 154 4e-32
seq455 91.5 4e-13
>seq1671
Length=1351
Score = 174 bits (192), Expect = 4e-38
Identities = 170/219 (78%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| ||| | ||| ||||| ||||| ||||||| ||||| |||| ||||||||| ||
Sbjct 371 TCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACC 312
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
|||||| | ||||| ||||| ||||| | || ||||||||| || ||||||||||||||
Sbjct 311 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTT 252
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||||||||| ||| ||| || || ||||| || | ||| || || | || ||
Sbjct 251 GTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAAT 192
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| || || ||||| || | ||| | |||||| ||
Sbjct 191 AGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 153
>seq1903
Length=957
Score = 158 bits (174), Expect = 3e-33
Identities = 159/207 (77%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| ||| | || | ||||||||| ||||||| ||||| || | | |||||| ||
Sbjct 521 TCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACC 580
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||||| | ||||| ||||| ||||| | || ||||||||| || || |||||||||||
Sbjct 581 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 640
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||||||||| ||| ||| || |||||||| || | ||| || || || |||||
Sbjct 641 GTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGAT 700
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAA 225704
||||| || |||||||| || | |||
Sbjct 701 GGTCTTACCAGTCAAAGTCTTAACGAA 727
>seq2730
Length=4271
Score = 154 bits (170), Expect = 4e-32
Identities = 156/203 (77%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555
||||||| || | ||| ||||| ||||| ||||||| ||||| || | ||| |||||
Sbjct 3915 AGTCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTA 3856
Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615
||||||||||||||||| || || ||||| | | ||||| || || || |||||||||
Sbjct 3855 CCATCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCCGGAGGGATACCTTCC 3796
Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675
||||| ||||| || ||| || ||||| ||||| |||| ||| || ||||| |||
Sbjct 3795 TTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTG 3736
Query 225676 ATCGTCTTGCCCGTCAAAGTTTT 225698
|| || || || |||||||| ||
Sbjct 3735 ATGGTTTTACCGGTCAAAGTCTT 3713
Score = 132 bits (146), Expect = 1e-25
Identities = 160/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555
|| || || ||||| || | ||||| || || || | |||||||| | || |||||
Sbjct 3687 AGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTA 3628
Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615
|| |||||||||||||| || || ||||| | || |||||| || || || |||||||||
Sbjct 3627 CCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCC 3568
Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675
|||||||| || || ||| || |||||||| || || | ||| || || || ||
Sbjct 3567 TTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTT 3508
Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || || || |||||||| || | ||| | |||||
Sbjct 3507 ATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 3470
Score = 113 bits (124), Expect = 1e-19
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576
|| || ||||| || | || ||||| | || ||||| || ||||| || ||||| |||
Sbjct 4122 GTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCA 4063
Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636
|| || || | || |||||| || || |||||||||||||||||||| || || |||
Sbjct 4062 GCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTA 4003
Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTT 225696
|| ||||| ||||| || | ||| || |||| || || ||||| || |||| ||
Sbjct 4002 ACGTTGTCGATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTC 3943
Query 225697 TTTATGAACACTTGCAT 225713
|| | || | ||||||
Sbjct 3942 TTGACAAAAATTTGCAT 3926
>seq455
Length=2740
Score = 91.5 bits (100), Expect = 4e-13
Identities = 80/100 (80%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529
||| ||||||||||| ||||| || |||||||| || || |||||||| || ||||||||
Sbjct 656 GAAAATTTGACCATCGGTAATGGAAATAACATTGGTTGGAATATAAGCGGAGACATCACC 715
Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCA 4569
|||| ||||| | |||||| || || |||| || |||
Sbjct 716 ACCTTGGGTTTCAATAACAGGCAAAGCAGTTAAAGAACCA 755
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192484781468372
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |