Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001578385.1_202016-03-
02] 3,038 sequences; 10,012,846 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq2325 203 3e-47
>seq2325
Length=5997
Score = 203 bits (224), Expect = 3e-47
Identities = 563/855 (66%), Gaps = 24/855 (3%)
Strand=Plus/Minus
Query 4240 TTGAACA-AACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTG 4298
||| ||| ||||||| |||||||| || || |||| |||||||||||| ||||| ||
Sbjct 2557 TTGGACATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCTTA 2498
Query 4299 CCTTCTAACGAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTT-TTC 4357
|| | || || || |||||||| ||||| || || || | ||||| | ||| ||
Sbjct 2497 CCGGCCAAGGAGATGTTTTCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCTTG 2438
Query 4358 ACACTTTAGAGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTC 4417
|| | ||| || | || || ||| || || || || | || ||| |||| | ||
Sbjct 2437 TTACCGAA-AGCGACCAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGTC 2379
Query 4418 GCAGTTAATTCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCT---TGTTCTAT 4474
||| || || | || || |||| |||| ||| || | | ||||| ||
Sbjct 2378 AGCGTTCATACCTAGCAAAGCAACTGGTAAGGCGTC---CAAGAAGTATCTTTGTTCAAT 2322
Query 4475 AGTTACGGCTTCTGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTA 4534
|| || || |||| || | || | | || |||||| || || |
Sbjct 2321 TTCCACAGCCTCGGTGACAATTTTTTCAACAATGGCTGGGTCTGGTTTGTTCTTCAAATG 2262
Query 4535 TCCAAACAATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTT 4594
| ||||| || || ||||| || ||||||||||||||||| | |||| ||||||
Sbjct 2261 GGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTT 2202
Query 4595 AGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGA 4654
||||| ||||| |||||||| | |||||||||||| | ||| || || | |||||| ||
Sbjct 2201 GGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGA 2142
Query 4655 CCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCT 4714
|| || || || | ||||| | || |||||| || |||| || || ||| ||
Sbjct 2141 ACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGC 2082
Query 4715 GGCTTTGTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACG---CACGGAAT 4771
| | ||||| ||||||| |||| ||||| | || |||| | || || ||
Sbjct 2081 GTCAGCGTCTTGAATCCATCTTAAAGCCCATTCGGC---CTTCTCACCGATTTCTGGGAT 2025
Query 4772 TGTGTATATAGCGTT---AAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTC 4828
|||| || || || || |||| ||||| || | ||||| | || ||||| ||
Sbjct 2024 GGTGTGAATGGCATTGAACAAGAATTCACTTTCTTTA---GGGTCCTTGATGTAAGTATC 1968
Query 4829 TATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAA 4888
|| | | | || ||||||| || |||||||| || || || || ||||| ||
Sbjct 1967 GATCAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAA 1908
Query 4889 GCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTAC 4948
| | || |||| | ||| |||||| | | || |||| || |||||||| || ||
Sbjct 1907 ACTCTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAAC 1848
Query 4949 TATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGG 5008
||||||||| || || ||||| || | ||| || || || | ||||
Sbjct 1847 AATACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTTTC 1788
Query 5009 CTTAAGT---TTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCA 5065
|| | | || ||||||| | | ||| |||| ||||||| ||||||| | |||||
Sbjct 1787 GTTCATTCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCA 1728
Query 5066 AAACGACGCTTCCGC 5080
|| || ||||| ||
Sbjct 1727 GAAAGAAGCTTCGGC 1713
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427033788221654
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |