Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001584535.1_202015-12- 07] 125 sequences; 11,620,879 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq51 107 2e-18 seq33 105 7e-18 >seq51 Length=181042 Score = 107 bits (118), Expect = 2e-18 Identities = 285/433 (66%), Gaps = 7/433 (2%) Strand=Plus/Minus Query 93896 CCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGA 93955 |||| || | |||||||| || || || || || |||||||| |||||| | | Sbjct 29165 CCCCAACTTTATTCAACGCTGGTACGCCACATCCTCAAATGTCTTCATGTTTCTTAGTTG 29106 Query 93956 CGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCT 94015 | | |||| ||||| ||| || |||| || | | || || ||||| | || | Sbjct 29105 CCATGAAGGATGACTCTATCGAAGGTATTTATGATACTTTGAAAGAATGTGCTATGATTT 29046 Query 94016 CAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACA 94075 | ||| || || || | || | | || || || | ||| ||| ||||| || | Sbjct 29045 CCAAAACTGCAGGTGGTGTTGGTCTTCATATCAACAACATCCGTTCCACAGGTTCTTATA 28986 Query 94076 TCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACG 94135 || |||||||| || || || ||||| | | |||||| | || || ||||| || Sbjct 28985 TCGCTGGTACCAACGGTACTTCAAACGGGTTGATTCCTATGATTCGTGTTTTCAATAATA 28926 Query 94136 CGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCG 94195 | || || || ||||||||||||||| | ||| ||| ||||||| | | | | Sbjct 28925 CTGCCCGTTATGTGGACCAGGGTGGTAACAAGAGACCTGGTGCTTTCGCCCTTTTCTTGG 28866 Query 94196 AGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATC 94255 |||| ||||| || || | | ||| || || | | ||||||||||| || || Sbjct 28865 AGCCATGGCATGCAGATATCTTTGATTTTATTGATATTAGGAAGAACCACGGTAAAGA-- 28808 Query 94256 TGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAAC 94312 ||| | | || ||||| | ||| ||||| ||| | || || ||||| ||||| | Sbjct 28807 -GGAAATTCGTGCAAGAGATTTGTTCCCTGCTCTATGGATTCCTGATCTTTTCATGAAGC 28749 Query 94313 GCGTCG-AGAAAA 94324 | |||| |||||| Sbjct 28748 GTGTCGAAGAAAA 28736 >seq33 Length=550408 Score = 105 bits (116), Expect = 7e-18 Identities = 287/437 (66%), Gaps = 7/437 (2%) Strand=Plus/Plus Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951 ||| | || || ||||||| || || || || || || ||||| || |||||| || Sbjct 293289 GCCTCTCCAACGTTGTTCAATGCCGGTACTCCAAAACCTCAAATGTCCTCTTGTTTCTTG 293348 Query 93952 ATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011 | | | |||| ||||| ||| || |||| ||||| | | ||||| ||||| Sbjct 293349 GTTGCCATGAAGGAGGACTCTATCGAGGGGATTTACGACACCTTGAAGGAATGTGCTTTG 293408 Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071 || || ||| || || || || || | | |||| || | ||| | | ||||| Sbjct 293409 ATTTCCAAAACTGCTGGTGGTATTGGTCTACATATCCATAACATTCGTTCAACTGGTTCT 293468 Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131 ||||| ||||| || || || || ||||| | | |||||| | || || ||||| Sbjct 293469 TACATTGCTGGTACAAACGGTACTTCTAACGGTTTAATTCCTATGATTCGTGTTTTCAAT 293528 Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191 ||| | || || || || |||||||||||| | || ||| | || || | || Sbjct 293529 AACACCGCCCGTTATGTTGACCAGGGTGGTAATAAAAGACCTGGTGCGTTTGCCCTTTAC 293588 Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251 || || || ||||| || || | | ||| || || | | ||||||||||| || Sbjct 293589 CTGGAACCATGGCATGCTGATATCTTTGATTTTATTGATATTAGGAAGAACCACGGTAAA 293648 Query 94252 GATCTGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATG 94308 || ||| | | || ||||| | ||| ||||| ||| | || || ||||| ||| Sbjct 293649 GA---GGAAATTCGTGCAAGAGATTTGTTCCCTGCTCTATGGATTCCTGATCTTTTCATG 293705 Query 94309 AAACGCGTCG-AGAAAA 94324 || || |||| |||||| Sbjct 293706 AAGCGTGTCGAAGAAAA 293722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722426995000