Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001584535.1_202015-12- 07] 125 sequences; 11,620,879 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq33 163 3e-35 seq51 122 1e-22 >seq33 Length=550408 Score = 163 bits (180), Expect = 3e-35 Identities = 786/1240 (63%), Gaps = 25/1240 (2%) Strand=Plus/Minus Query 109918 TCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTAC 109977 ||||||||||| || |||| ||| | || ||||||||| || | |||| | ||||| Sbjct 294415 TCCCACATATCAAACTGTAGTATACCTTGAGAAGCAGGAGATCCTTGGAAAGTTTCGTAT 294356 Query 109978 GACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCA 110037 | || || || || | || | ||||| || | | |||||||| ||||| ||| Sbjct 294355 GGACCGTCCTTCTGAGCTAGTTCACAAGAAGCTTCCATGGAGGCATGATAAATAGTTTCA 294296 Query 110038 AAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAGAATA 110097 || || || ||| | | || | || ||| | || || || | || | || || Sbjct 294295 AAGATTTGGATATTTAGCAAACGGGCTTCCTCAGAATCAAATGGCAAACGTAACAGCATG 294236 Query 110098 AACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGT 110157 || || || ||||| |||||||| | | |||| || | ||| |||| || || | Sbjct 294235 AAAGTGTCAGCGAGACCTTGAACACCCAAAGCAATTGGTCTATGTCTCATATTGGATTTT 294176 Query 110158 CGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACA 110217 | || ||| || ||||| | || || || ||||| | || | ||| || ||| Sbjct 294175 CTCGCTTCTTCAACAGGGTAGTAATTACGATCAATGACTCTGTTTAAATTACGAGTAACA 294116 Query 110218 GTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCT------CCTTA--- 110268 || | |||||||| | ||| | | | | | | || |||| ||| | Sbjct 294115 ACTTTAGCAATTTCATGTAATTTTTTGAAGTTGTATGTGGAAGTCTTACCATCCTCAGAA 294056 Query 110269 -TTGACATATTTG--GGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTG 110325 || || || || | |||| || || | || || |||| ||| || ||| Sbjct 294055 GTTTCAATGAATGCTGGTAAGGCAACGGAAGCCAAGTTACAAACAGCAGTTTCATCTGGA 293996 Query 110326 TCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTC 110385 | | |||||| | |||||| || ||||| || ||| |||||||| ||||| || Sbjct 293995 GCTGAGTATTCAACAATTTCACAGCATAAGTTTGATGACTTGATGACACCTAAGTTTTTT 293936 Query 110386 TGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTC 110445 ||||| ||||| ||| || |||||||| || | | | | || ||||||||||| || Sbjct 293935 TGATTAGATTTTCTGTTACAAGCATCCTTGTAAACAACGAAAGGTGTACCAGTTTCAGTT 293876 Query 110446 TGTGACTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCT 110505 || | | | ||||| | ||||| | ||| || ||| ||| | ||||| Sbjct 293875 TGAGCTTCCAAAATGGAATACCATAATTTTTGGGCTTTGATAGTC---TTACCACGACCT 293819 Query 110506 TCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCC 110565 || | |||||| ||| || | ||||||| || | ||||| ||| | ||| Sbjct 293818 TCTTTCTCGTAGCGGGTATATAGTGCCTCAAACTCGTCACCGTAACAATCGCTTAAACCA 293759 Query 110566 TTCGCCT-TGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAA 110624 || ||| || | |||| | | ||| | ||| || || || | ||||||||| Sbjct 293758 GGAGCTGATGTTGG-AGAGAATAATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAA 293700 Query 110625 CAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTG 110684 || ||||||||||| | || | ||| | || | |||| || || | ||| || Sbjct 293699 AAGATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTG 293640 Query 110685 GTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGC 110744 ||| | | || | ||| || | |||||| | ||||||||||| || || | || Sbjct 293639 GTTCTTCCTAATATCAATAAAATCAAAGATATCAGCATGCCATGGTTCCAGGTAAAGGGC 293580 Query 110745 GATGGATCC----CTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGA 110800 | | || ||| | ||| |||||| |||||| || || ||| |||||| | Sbjct 293579 AAACGCACCAGGTCTT-TTATTACCACCCTGGTCAACATAACGGGCGGTGTTATTGAAAA 293521 Query 110801 CCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTAT 110860 | | | ||||||||| | || | || ||| |||||||| ||| || | Sbjct 293520 CACGAATCATAGGAATTAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAG 293461 Query 110861 TGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCAC 110920 | | |||||||| |||||||| | |||||||||||| || || ||| |||| Sbjct 293460 TTGAACGAATGTTATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCAC 293401 Query 110921 ACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGC 110980 | || | | || | ||||| || || || || || |||| |||||| | || | Sbjct 293400 ATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAAC 293341 Query 110981 AAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGA 111040 |||| ||||| ||||| || || || |||||||| | || || | || ||| | | Sbjct 293340 AAGAGGACATTTGAGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGCGTGAGT-A 293282 Query 111041 ACAGACCTT-GGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGA 111099 | | | || | |||||| ||| || || || | || | | |||| ||||||| Sbjct 293281 AAATATTTTAGAGACATCAAGTTATACGTTTCTAAAGCAGCCTCGATATCTCTACCGTGG 293222 Query 111100 ATACCAATGGCAACTCGCATGAACATATATTGAGG-CGTT 111138 || || | || |||| ||| | | || ||| || |||| Sbjct 293221 ATGCCTAGTGCGACTCTCATAATTAAATGTTGTGGACGTT 293182 >seq51 Length=181042 Score = 122 bits (134), Expect = 1e-22 Identities = 493/769 (64%), Gaps = 16/769 (2%) Strand=Plus/Plus Query 110281 GGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAA 110340 || || |||||||| || | ||| || || | || || || | || ||||| | Sbjct 28418 GGTAGGGCAATAGAAGCTAAATTACAAACTGCGGTTTCATCCGGGGAGGAATATTCGACG 28477 Query 110341 ATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAG 110400 ||||| ||| ||||| || || || ||| ||||||| || || | || | Sbjct 28478 ATTTCACAACATAAGTTAGATGATTTGATAGTACCTAAGTTCTGTTGGTTTGTCTTCCTG 28537 Query 110401 TTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTG-AGAAT 110459 || ||||| |||||||| | |||| | || ||||| ||||| ||||||| |||| | ||| Sbjct 28538 TTACATGCGTCCTTATAAACCATGAAAGGTGTACCTGTTTCTGTCTGTG-CTTGCAAAAT 28596 Query 110460 GGCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTT 110519 ||| | ||| | | ||| | ||| ||| | ||||||| ||||| Sbjct 28597 GGCATACCACAACTTTTGGGCTTTAATTGTT---TTACCACGACCTTCTCTTTCGTAACG 28653 Query 110520 GGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGG 110579 || || | || |||||||| | || |||||||| | ||| || ||| Sbjct 28654 AGTATATAGTTCTTCAAATTCATCACCCCACACATCATCTAAACCTGGGGCAGCACTGGG 28713 Query 110580 ACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCA 110639 | || | | ||| | ||| || || || | ||||||||| || ||||||||||| Sbjct 28714 TGAAAATAATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCCA 28773 Query 110640 CATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTC 110699 | || | ||| | || | |||| || || | ||| ||||| | | || Sbjct 28774 TAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTGGTTCTTCCTAATATC 28833 Query 110700 CAAAAAGTCCATGATATCCGAGTGCCATGG-TTCGAGATA-----GACAGCGATGGATCC 110753 | ||| || | |||||| | |||||||| | | ||| | || ||| | || Sbjct 28834 AATAAAATCAAAGATATCTGCATGCCATGGCTCCAAGAAAAGGGCGAAAGCACCAGGTCT 28893 Query 110754 CTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGG 110813 ||| || || |||||| ||||| || || || |||||| || | | |||||| Sbjct 28894 CTTGTTACCAC---CCTGGTCCACATAACGGGCAGTATTATTGAAAACACGAATCATAGG 28950 Query 110814 AATAATTCCATCGGATTGACCATTTGTACC-CCTAATTCTGGACTTATTGGCACGAATGT 110872 ||| | || | || ||| || ||||| | | | | || | ||| ||| |||| Sbjct 28951 AATCAACCCGTTTGAAGTACCGTTGGTACCAGCGATATAAGAACCT-GTGGAACGGATGT 29009 Query 110873 CGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACACTCTGTGAGTG 110932 || |||||| | ||||| |||||| || || ||| ||||| ||| | | | Sbjct 29010 TGTTGATATGAAGACCAACACCACCTGCAGTTTTGGAAATCATAGCACATTCTTTCAAAG 29069 Query 110933 TACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCT 110992 || |||||||||| || || || || |||| |||||| || || || |||||||| | Sbjct 29070 TATCATAAATACCTTCGATAGAGTCATCCTTCATGGCAACTAAGAAACATGAAGACATTT 29129 Query 110993 GAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAA 111041 ||||| | ||||| || || ||||| | || || | || ||| |||| Sbjct 29130 GAGGATGTGGCGTACCAGCGTTGAATAAAGTTGGGGAAGCGTGAGTGAA 29178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975079725000