Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001584535.1_202015-12- 07] 125 sequences; 11,620,879 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq81 185 2e-41 seq79 147 4e-30 seq66 114 2e-20 >seq81 Length=89741 Score = 185 bits (204), Expect = 2e-41 Identities = 183/237 (77%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| ||||||||||||| || | |||| || | |||| || || || || Sbjct 57951 AATTTGCATACCACCTCTCAGTCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTT 58010 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||||| || || |||||| ||| |||| ||| || || |||||||| ||||||||||| Sbjct 58011 GTAGTCAGACAAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTG 58070 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| ||||| || |||||||||||||| ||||| |||| | || |||||| ||||| Sbjct 58071 ATCCGGAGGGATACCTTCTTTATCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGA 58130 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||| ||||| ||||| |||||||| || |||||||| ||||| || || |||||||| Sbjct 58131 AGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 58187 Score = 185 bits (204), Expect = 2e-41 Identities = 183/237 (77%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| |||||||||||||||| | |||| |||||| |||| |||||| ||| || Sbjct 58179 AATTTGCATACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTT 58238 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||| || || | ||||||| || || | ||| || |||||||| || ||||| ||||| Sbjct 58239 ATAATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTG 58298 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| ||||| || ||||| || ||||| ||||| | || | || |||||| || || Sbjct 58299 ATCTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGA 58358 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||| ||||| ||||| |||||||| |||||||| || || || ||||| |||||||| Sbjct 58359 AGATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 58415 Score = 138 bits (152), Expect = 2e-27 Identities = 178/245 (73%), Gaps = 2/245 (1%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||||||||| | | || || ||||| || || | ||| || ||| || || || Sbjct 58642 ATACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCA 58701 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | ||||||| || |||| || || |||||||| || ||||| |||||||| ||| Sbjct 58702 GACAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGA 58761 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| || ||||| ||||| | || | || || ||||||||||| ||| Sbjct 58762 GGGATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCA 58821 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT--TTTATTAG 193368 ||||| | ||||| |||||||| || | || || || || || ||||| | |||||| Sbjct 58822 ACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATAATCTATTAG 58881 Query 193369 TAAAA 193373 | ||| Sbjct 58882 TTAAA 58886 Score = 125 bits (138), Expect = 1e-23 Identities = 170/237 (72%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| |||||||||||||||| | |||| || | |||| || || || || Sbjct 58407 AATTTGCATACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTT 58466 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||||| || || |||||| || |||| || || |||||||| || || |||||||| Sbjct 58467 GTAGTCAGACAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTG 58526 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| ||||| || ||||| || || || ||||| | || | || || || ||||| Sbjct 58527 ATCTGGAGGGATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGA 58586 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || ||||| |||| ||| || |||||||| || | || || ||||| || ||||| Sbjct 58587 GGATTCAACCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 58643 >seq79 Length=319294 Score = 147 bits (162), Expect = 4e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192 |||||||||||||| | |||| || | |||| || || || || |||||||| Sbjct 297906 ACCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGA 297965 Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252 || |||||| ||| || ||||| || || ||||| || ||||| ||||| ||||| || Sbjct 297966 CAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 298025 Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312 || ||||| || ||||| || |||| || | ||| |||||| || ||||| ||||| Sbjct 298026 AATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 298085 Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 ||| || || ||||| ||||| |||| || || || || |||||||| || Sbjct 298086 TTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 298136 Score = 129 bits (142), Expect = 1e-24 Identities = 161/221 (73%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||||||||||| | || | ||||| || | ||||| ||| || ||||| Sbjct 55074 ATACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCA 55015 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || || |||||| || || ||||| || || ||||| || ||||| ||||| ||||| Sbjct 55014 GACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGT 54955 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| || ||||| || || | || | ||| |||||| || ||||| ||| Sbjct 54954 GGGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCA 54895 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAA 193351 ||||| | ||| || || ||||| || | || || ||||| Sbjct 54894 ACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 54854 >seq66 Length=69223 Score = 114 bits (126), Expect = 2e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||||||||| |||| | |||| ||| || || | || || || || ||||| Sbjct 39948 ATACCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCA 40007 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 |||| |||||| || || ||||| || || ||||| || ||||| ||||| ||||| Sbjct 40008 GATAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGT 40067 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| || ||||| || |||| || | ||| ||| || || ||||| ||| Sbjct 40068 GGGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCA 40127 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGT 193336 ||||| | ||| || || ||||| || Sbjct 40128 ACTTCCAAAGTGATGGTCTTACCAGT 40153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899652994290000