Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001584535.1_202015-12- 07] 125 sequences; 11,620,879 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq51 105 7e-18 >seq51 Length=181042 Score = 105 bits (116), Expect = 7e-18 Identities = 283/430 (66%), Gaps = 2/430 (0%) Strand=Plus/Minus Query 53270 TACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCG 53329 ||||| || ||||| | ||||| | ||||||||||||||| || ||||| ||||| Sbjct 29181 TACTTCACTCACGCTTCCCCAACTTTATTCAACGCTGGTACGCCACATCCTCAAATGTCT 29122 Query 53330 AGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAG 53389 || ||| | || || |||||||||||||| ||||| || || || || || | || Sbjct 29121 TCATGTTTCTTAGTTGCCATGAAGGATGACTCTATCGAAGGTATTTATGATACTTTGAAA 29062 Query 53390 GAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCACTGCTCGAACGTCCGT 53449 || ||||| || ||||| | |||||| | ||| | || | ||| ||||| Sbjct 29061 GAATGTGCTATGATTTCCAAAACTGCAGGTGGTGTTGGTCTTCATATCAACAACATCCGT 29002 Query 53450 GCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCTC 53509 | | || | ||| || || ||||| | | || | | |||||| | Sbjct 29001 TCCACAGGTTCTTATATCGCTGGTACCAACGGTACTTCAAACGGGTTGATTCCTATGATT 28942 Query 53510 CGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCG 53569 || || ||||| || || ||||| || || ||||||||||| ||| | || | Sbjct 28941 CGTGTTTTCAATAATACTGCCCGTTATGTGGACCAGGGTGGTAACAAGAGACCTGGTGCT 28882 Query 53570 TTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTG 53629 |||||| | | | | ||||| ||||| || || || | || ||| | || | | | Sbjct 28881 TTCGCCCTTTTCTTGGAGCCATGGCATGCAGATATCTTTGATTTTATTGATATTAGGAAG 28822 Query 53630 AATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTTTACAGCTCTGTGGATTCCGGA 53688 || || ||| | || || || || ||| | || |||| | ||||| |||||||| || Sbjct 28821 AACCACGGTAAAGAGGAAATTCG-TGCAAGAGATTTGTTCCCTGCTCTATGGATTCCTGA 28763 Query 53689 CCTCTTCATG 53698 || |||||| Sbjct 28762 TCTTTTCATG 28753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215144975000