Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001592655.1_202016-03-
15] 17 sequences; 12,071,877 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq12 131 4e-25
seq9 105 2e-17
seq11 95.1 3e-14
>seq12
Length=1012308
Score = 131 bits (144), Expect = 4e-25
Identities = 158/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471
||||||| || | ||| ||||| || |||||||||| ||||||||||| ||| || ||
Sbjct 53685 AGTCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTA 53744
Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531
|||||||| |||||||| ||||| ||||| | | ||| || |||||| || |||||
Sbjct 53745 CCATCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCCGGAGGGATACCTTCC 53804
Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591
||||| || || ||| ||| |||| ||||| | | ||| || || || |||
Sbjct 53805 TTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTG 53864
Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || ||||| || | ||| || ||||| || ||
Sbjct 53865 ATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTG 53899
Score = 122 bits (134), Expect = 2e-22
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 199415 CTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCA 199474
|||| ||||||||| ||||| ||||||||||| | |||||||| | || || || |||
Sbjct 53004 CTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCA 53063
Query 199475 TCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGC 199534
||||| || ||||| ||||| || || | | |||||||| ||| ||| |||||
Sbjct 53064 TCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTG 53123
Query 199535 TCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATC 199594
|| ||||| || ||| ||| || | ||||| | | ||| || || | || ||
Sbjct 53124 TCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATA 53183
Query 199595 GTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|||||||| || || || || |||||||||||
Sbjct 53184 GTCTTACCTGTCAGTGTCTTGACAAAAATTTG 53215
Score = 118 bits (130), Expect = 2e-21
Identities = 155/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471
||||||| || | ||| ||||| || |||||||||| ||||||||||| ||| || ||
Sbjct 53229 AGTCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTA 53288
Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531
|||||||| || ||||| || || || || | | ||| || |||||| || ||||||
Sbjct 53289 CCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCT 53348
Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591
|| ||||| || || ||| || | ||||| | | ||| || || | ||
Sbjct 53349 TTATCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTT 53408
Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| ||||| || || |||||||| || ||||||||
Sbjct 53409 ATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTG 53443
Score = 86.0 bits (94), Expect = 1e-11
Identities = 76/95 (80%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 200930 AAAAACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 200989
||| | | ||||| || || ||||| ||||||||||| || |||||| |||| ||||||
Sbjct 453025 AAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAACA 453084
Query 200990 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 201024
|||| || || |||||||| ||| | || ||||||
Sbjct 453085 TCCAAAAGGAATCTACTCTACACTTGGTCTTGAGA 453119
Score = 84.2 bits (92), Expect = 5e-11
Identities = 72/89 (81%), Gaps = 0/89 (0%)
Strand=Plus/Minus
Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997
||||| ||||| |||||| | |||||||| || || ||| | || |||||| |||| ||
Sbjct 53773 ATCTTTGCCGGTAAGCAGCTAGAAGATGGTAGAACCTTGTCTGACTACAACATCCAAAAG 53714
Query 200998 GAGTCTACTCTTCACCTTGTTTTGAGACT 201026
|| |||||||||||| | || ||||||||
Sbjct 53713 GAATCTACTCTTCACTTGGTGTTGAGACT 53685
>seq9
Length=467559
Score = 105 bits (116), Expect = 2e-17
Identities = 148/208 (71%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| ||| | ||| | ||| || || ||||| | ||||||||||| ||| || || ||
Sbjct 71899 TCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACC 71840
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
||||||| ||||| || || ||||| | | || ||||| || || |||||
Sbjct 71839 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 71780
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
|| ||||||||| ||| || || | ||||| | | ||| || ||||| |||||
Sbjct 71779 GTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGAT 71720
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAA 199621
|||||||| || | ||| || ||||||
Sbjct 71719 GGTCTTACCAGTCAAAGTCTTGACAAAA 71692
>seq11
Length=703617
Score = 95.1 bits (104), Expect = 3e-14
Identities = 145/207 (70%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| ||| | || | ||| || |||||||||| ||||||||||| | ||| || ||
Sbjct 652229 TCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACC 652288
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
||||||| ||||| || || ||||| | | || ||||| || || |||||
Sbjct 652289 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 652348
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
|| || ||||| ||| || || | |||||| | | ||| || ||||| |||||
Sbjct 652349 GTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGAT 652408
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAA 199620
|||||||| || | ||| || || ||
Sbjct 652409 GGTCTTACCAGTCAAAGTCTTAACGAA 652435
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178921343216139
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |