Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001592655.1_202016-03-
15] 17 sequences; 12,071,877 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq12 116 3e-21
>seq12
Length=1012308
Score = 116 bits (128), Expect = 3e-21
Identities = 154/214 (72%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 27035 CAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTC 27094
||| ||||| || | ||||| || ||||| || |||||||| || | | | | ||
Sbjct 53234 CAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATC 53293
Query 27095 TTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATC 27154
||| || || ||||| || |||| | | |||||||||||| || | ||| ||||||||
Sbjct 53294 TTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATC 53353
Query 27155 GGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGA 27214
|| || |||| | | | || | |||||| | | |||||| ||||| |||||||
Sbjct 53354 TTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGT 53413
Query 27215 TTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| || || |||||||| || || |||||||||
Sbjct 53414 CTTCCCTGTTAGAGTTTTGACGAAAATTTGCATA 53447
Score = 102 bits (112), Expect = 7e-17
Identities = 151/214 (71%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 27035 CAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTC 27094
||| ||||| || | ||||| || ||||| || |||||||| || | | | | ||
Sbjct 53690 CAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATC 53749
Query 27095 TTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATC 27154
||| ||||| |||||||| | || | | |||||||||||| || | ||| || || ||
Sbjct 53750 TTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCCGGAGGGATACCTTCCTTGTC 53809
Query 27155 GGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGA 27214
||| || || | | | || | ||||| | || |||||| |||| ||| || |
Sbjct 53810 CTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGT 53869
Query 27215 TTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
||| || |||| ||| || |||||||| ||||||
Sbjct 53870 TTTACCGGTCAAAGTCTTAACAAAGATCTGCATA 53903
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 27018 TTGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCG 27077
|| || || | ||||| ||| || | || | || || || |||||||||||||||||
Sbjct 52989 TTACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCC 53048
Query 27078 CTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGC 27137
|| | | | ||||| || || |||||||| |||| | | || || || ||
Sbjct 53049 GACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGA 53108
Query 27138 GGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCA 27197
|| | ||| || || || || || || | | | || | |||||| | | ||||
Sbjct 53109 GGAATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCA 53168
Query 27198 ACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| ||||| ||||||| || || ||||| || || ||||| |||||||||
Sbjct 53169 ACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCATA 53219
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424934311958904
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |