Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001634645.1_202016-05-
11] 32 sequences; 12,377,172 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq12 132 3e-26
seq9 125 5e-24
>seq12
Length=1070766
Score = 132 bits (146), Expect = 3e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||||||||| || || ||||| | || || ||||| || ||||| |||||
Sbjct 53906 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 53965
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
|| |||| ||||||| | ||| || ||||| | ||||| | ||| ||||| |||
Sbjct 53966 AGCGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATCAATCTTTGCTGGTCTGGAGGA 54025
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| ||||| ||||| |||||| ||| || | || || || || | ||| ||
Sbjct 54026 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACC 54085
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|||| ||| || || ||||||||||| || || |||||||||||||||
Sbjct 54086 TCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCATA 54133
Score = 131 bits (144), Expect = 1e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||||||||| || || || || || || || || ||||| |||||||| |||
Sbjct 485574 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 485515
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
| | |||| | ||||| ||||| || ||||| | ||||| | ||||||||| ||||
Sbjct 485514 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 485455
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| ||||| ||||| || ||| ||| ||| | || || || || | ||| ||
Sbjct 485454 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 485395
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15366
|| | |||||| || ||||| || | ||| || || ||||||||||| ||
Sbjct 485394 TCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 485345
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||||| ||| || || || ||||| || || || ||||| |||||||| ||
Sbjct 53678 CCACCTCTCAGTCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 53737
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
| |||| | ||||||| ||| || ||||| | ||||| | ||||| || ||
Sbjct 53738 AAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGG 53797
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| |||||||| || |||||| || || || | || || || ||| | ||| ||
Sbjct 53798 ATACCTTCTTTATCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACC 53857
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|||| ||| || || || ||||| |||||||| || ||||||||||||
Sbjct 53858 TCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCATA 53905
Score = 118 bits (130), Expect = 8e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
||||| ||||| || || || | ||||| ||||| || ||||| || ||||| ||
Sbjct 53450 CCACCCCTCAACCTCAAGACGAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGAC 53509
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
|| |||| | ||||||| ||| || || || | ||||| | ||| ||||| |||
Sbjct 53510 AGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGA 53569
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| ||||| ||||| |||||| ||| || | || || || || | ||| ||
Sbjct 53570 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACC 53629
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|||| ||| || || ||||||||||| || || |||||||||||||||
Sbjct 53630 TCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCATA 53677
Score = 118 bits (130), Expect = 8e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||| | |||| || | ||| | |||||| || || || |||||||||||
Sbjct 54362 CCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGAC 54421
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
|| |||| ||||||||| || || || || | ||||| | |||||| || ||
Sbjct 54422 AGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 54481
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| ||||| ||||| |||||| ||| || | || ||||||||| | ||| ||
Sbjct 54482 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACT 54541
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|| || || ||||||||||| |||| ||| || || ||||| ||||||
Sbjct 54542 TCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATA 54589
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||||| ||| || || || ||||| || || || ||||| |||||||| ||
Sbjct 54134 CCACCTCTCAGTCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 54193
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
| |||| | ||||||| || || || || | ||||| | ||||| || ||
Sbjct 54194 AAGGTTCTACCATCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCCGGAGGG 54253
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| ||||| ||||| ||||| ||| || | || || || ||| ||| ||
Sbjct 54254 ATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACC 54313
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
||||| || ||||||||||| |||| ||| || ||||| || ||||||
Sbjct 54314 TCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCATA 54361
>seq9
Length=461146
Score = 125 bits (138), Expect = 5e-24
Identities = 159/219 (73%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||||||||| || ||||| || | ||||| |||||||| |||||||| ||
Sbjct 88638 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 88579
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
| |||| ||||||| ||||| || ||||| | ||||| | ||||||||| |||
Sbjct 88578 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 88519
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| ||||| ||||| ||| || ||| ||| | || || || || | ||| ||
Sbjct 88518 ATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 88459
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAA 15355
|| || || ||||| ||||| |||| ||| || ||||||
Sbjct 88458 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAAA 88420
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 362179058750112
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |