Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001634645.1_202016-05-
11] 32 sequences; 12,377,172 total letters
Query= NC_019945.1
Length=132978
Score E
Sequences producing significant alignments: (Bits) Value
seq12 131 1e-25
seq9 102 7e-17
seq11 89.7 4e-13
>seq12
Length=1070766
Score = 131 bits (144), Expect = 1e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610
|| |||||||| || || || || ||||| ||||| || |||||| ||| ||| ||
Sbjct 485345 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 485404
Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670
|| || || | | | || ||||| || ||| ||||| || || | || ||
Sbjct 485405 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 485464
Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730
||||| ||| | |||||||| || || |||||||||||| || |||| || |||| ||
Sbjct 485465 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTAC 485524
Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780
||||| ||||| ||||||||||| ||| |||| || ||||| |||| ||
Sbjct 485525 AACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 485574
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
|||||||| || || ||||| |||| || || || || ||| || ||| ||||
Sbjct 53904 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 53845
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| || | | | | |||| ||||| || ||||| || | || ||||||
Sbjct 53844 GACACTATTGACAACGTCAAAAGTAAAATTCAAGATAAAGAAGGTATCCCTCCGGATCAA 53785
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
|||||| | || ||||| || || ||| | |||||| || ||| || | || || |||
Sbjct 53784 CAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAAC 53725
Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
|| ||||| ||||||||||| ||| |||| || ||| | |||| || ||
Sbjct 53724 ATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGACTGAGAGGTGGTAT 53675
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
|||||||| ||||| || ||| | || ||||| || || ||| || ||| ||||
Sbjct 54132 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 54073
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| || | | | | | ||| ||||| ||||| || || | || ||| ||
Sbjct 54072 GACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 54013
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
|| ||| | || ||||| || || ||| ||||||| || ||| || | |||||||||
Sbjct 54012 CAAAGATTGATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAAC 53953
Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
||||| ||||| ||||| |||| |||| || ||||| |||| || ||
Sbjct 53952 ATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGGTAT 53903
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
||||| || ||||| || || || || ||||||||||| || || ||| | ||
Sbjct 54360 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 54301
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| ||| | | | | ||| |||||| ||||| || || | || ||||||
Sbjct 54300 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCGGATCAA 54241
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
||||| | |||||||| || || || | |||||| || ||| || | || || |||
Sbjct 54240 CAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGATGGTAGAACCTTGTCTGACTACAAC 54181
Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
|| ||||| ||||||||||| ||| |||| || ||| | |||| || ||
Sbjct 54180 ATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGACTGAGAGGTGGTAT 54131
>seq9
Length=461146
Score = 102 bits (112), Expect = 7e-17
Identities = 157/224 (70%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 28563 TTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCAGAGACGGTG 28622
||||| || || || || ||||| ||||| || ||| ||| |||| || || |
Sbjct 88421 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 88480
Query 28623 GCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTT 28682
| | || ||||| ||| || ||||| || || | || || ||||| ||| |
Sbjct 88481 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 88540
Query 28683 ATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAACATTCAAAAA 28742
|||||||| || || ||||||||||| || ||| || | || || ||||||||||||
Sbjct 88541 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAA 88600
Query 28743 GAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGATAAT 28786
||||| ||| ||||| | || || ||||| |||| || || ||
Sbjct 88601 GAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGGTATCAT 88644
>seq11
Length=690853
Score = 89.7 bits (98), Expect = 4e-13
Identities = 154/224 (69%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 28563 TTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCAGAGACGGTG 28622
|| || || || || || ||||| ||||| || ||| ||| |||| || || |
Sbjct 640101 TTCGTTAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATT 640042
Query 28623 GCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTT 28682
| | || ||||| || ||| ||||| || || | || || ||||| ||| |
Sbjct 640041 GACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 639982
Query 28683 ATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAACATTCAAAAA 28742
|||||||| || || ||||||||||| || |||| | | || || ||||| |||||
Sbjct 639981 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTATCTGACTACAACATCCAAAAG 639922
Query 28743 GAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGATAAT 28786
||||| ||| | || |||| || |||||| |||| || || ||
Sbjct 639921 GAATCCACTTTACATTTGGTCTTGAGATTAAGAGGTGGTATCAT 639878
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425404634092128
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |