Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001634645.1_202016-05-
11] 32 sequences; 12,377,172 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq5 181 3e-40
seq9 143 8e-29
seq13 131 5e-25
seq4 102 2e-16
seq15 84.2 6e-11
>seq5
Length=573699
Score = 181 bits (200), Expect = 3e-40
Identities = 482/732 (66%), Gaps = 12/732 (2%)
Strand=Plus/Minus
Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689
|||||| ||||| |||||||| | ||| || ||||||| ||||| || || || ||
Sbjct 303752 GTATTCAACAATTTCACAGCATAAGTTTGATGACTTGATGACACCTAAGTTTTTTTGATT 303693
Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749
|||||| |||||||||||||||||||| | || | | || || || || || | || ||
Sbjct 303692 AGATTTTCTGTTACAAGCATCCTTGTAAACAACGAAAGGTGTACCAGTTTCAGTTTGAGC 303633
Query 155750 GTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTG--CCTTCC 155807
|||| ||| ||| | | |||| |||| | || || | |||||
Sbjct 303632 TTCCAAAATGGAATACCATAATTTTTGGGC-----TTTGATAGTCTTACCACGACCTTCT 303578
Query 155808 GACTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGG- 155866
||| || |||| || | | || |||||||||||||| || | |||||
Sbjct 303577 TTCTCGTAGCGGGTATATAGAGCCTCAAACTCGTCACCGTAACAATCGCTTAAACCAGGA 303518
Query 155867 GCACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATAC 155926
|| | | || | | || | | ||| | ||| | ||||||| ||| || |
Sbjct 303517 GCTGATGTTGGAG-AGAATAATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAAAAG 303459
Query 155927 ATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATT 155986
|||| ||| | |||| ||| | || ||||| ||||| | ||||| ||
Sbjct 303458 ATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTGGTT 303399
Query 155987 CTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAA 156046
||||| | || | || || ||||||| ||| ||| ||||| || | |||||
Sbjct 303398 CTTCCTAATATCAATAAAATCAAATATATCAGCATGCCATGGTTCCAGGTAAAGGGCAAA 303339
Query 156047 ACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACC 156103
|||| || || |||||||| || ||||| || ||||| |||||||| ||||
Sbjct 303338 CGCACCAGGTCTTTTATTACCACCCTGGTCAACATAACGGGCAGTGTTATTGAAAACACG 303279
Query 156104 TAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGA 156163
| ||||||||| | ||| || ||||| || || || || ||| | ||||||| |||
Sbjct 303278 AATCATAGGAATTAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTTGA 303219
Query 156164 GCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTC 156223
|||| ||||| |||||||| ||||||||||| | ||| ||||| ||| |||||
Sbjct 303218 ACGAATGTTATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTC 303159
Query 156224 CTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGA 156283
||| | || | | |||| || || ||||| || || | ||| | | | | || ||
Sbjct 303158 CTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAACAAGA 303099
Query 156284 ACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATA 156343
| ||||||| ||| || || || ||||| | || || | || ||| |||||||
Sbjct 303098 GGACATTTGAGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGCGTGAGTAAAATA 303039
Query 156344 CTTATTAGACAT 156355
|| ||||||
Sbjct 303038 TTTTAGAGACAT 303027
>seq9
Length=461146
Score = 143 bits (158), Expect = 8e-29
Identities = 208/290 (72%), Gaps = 3/290 (1%)
Strand=Plus/Plus
Query 156060 TTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATA 156119
|| |||||||| || ||||| || ||||| |||||||| |||| | ||||||||| |
Sbjct 253911 TTACCACCCTGGTCCACATAACGGGCAGTATTATTGAAAACACGAATCATAGGAATCAAC 253970
Query 156120 CCATTGGAAGTGCCATTGGTTCC-GCGAATATGCGAACCAGATGAGCGAACATTATGAAT 156178
|| || ||||| || ||||| || |||| ||| ||||| | || || | || | ||
Sbjct 253971 CCGTTTGAAGTACCGTTGGTACCAGCGA-TATAAGAACCTGTGGAACGGATGTTGTTGAT 254029
Query 156179 ATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAA 156238
||| || |||| |||||||| ||| ||||| ||| ||||| || | ||||| |
Sbjct 254030 ATGAAGACCAACACCACCTGCAGTTTTGGAAATCATAGCACATTCTTTCAAAGTATCATA 254089
Query 156239 AATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCG 156298
||||||||| ||||| ||||| | ||| | | || | || ||| | |||||| |
Sbjct 254090 AATACCTTCGATAGAGTCATCCTTCATGGCAATTAAGAAACATGAAGACATTTGAGGATG 254149
Query 156299 TGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATA-CTTA 156347
||| || ||||||||||||| || || | || ||| | || || ||||
Sbjct 254150 TGGCGTACCAGCGTTGAATAAAGTTGGGGAAGCGTGAGTGAAGTATCTTA 254199
>seq13
Length=908319
Score = 131 bits (144), Expect = 5e-25
Identities = 256/378 (68%), Gaps = 3/378 (1%)
Strand=Plus/Plus
Query 288849 CCTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGC 288908
||| ||||| ||||||| | ||||||| || | ||||||| ||| || || |
Sbjct 425024 CCTGTCAAATCTACCAGGCCTTAATAATGCTTTATCGAGAATATCGGGTCTATTGGTACC 425083
Query 288909 TGCCAATACAACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGATT 288968
|| || ||||||| || | | | | || |||||||| | ||| ||||||||
Sbjct 425084 AGCTAAAACAACAACGTGGTCAGCTGGAGTGAAACCATCCATTTCTACTAACATTTGATT 425143
Query 288969 AAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCttttttt 289028
|| || | || || |||||||| | |||| ||| |||| | || ||||
Sbjct 425144 TAGCGTGTTCTCTCTCTCATCATTGGCACCTGAAAAATTACCCTTTTGTCTTGCTTTT-- 425201
Query 289029 ACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGC 289088
|| | |||||||||||||||||| || | | | || | ||||| ||| ||| ||
Sbjct 425202 -CCTATAGCATCAATTTCGTCAATAAACACAATCGAGGGTGCATTTTCTCTTGCAGTTTT 425260
Query 289089 AAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGC 289148
|| || |||||||| | | ||| |||| ||||||| |||||||||||||||| ||| |
Sbjct 425261 GAACAAATCTCTTACTCTTGCTGCACCAACACCAACAAACATTTCTACAAATTCTGAACC 425320
Query 289149 GGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTT 289208
|| || | || | ||| ||||| |||||| |||| | || || | || ||
Sbjct 425321 AGAAACAAAATAAAACGGAACACCGGCTTCACCTGCTGTTGCCTTTGCAAGCAAAGTTTT 425380
Query 289209 ACCTGTTCCAGGTGGTCC 289226
||| || || ||||| ||
Sbjct 425381 ACCGGTACCTGGTGGACC 425398
>seq4
Length=1556355
Score = 102 bits (112), Expect = 2e-16
Identities = 135/184 (73%), Gaps = 4/184 (2%)
Strand=Plus/Plus
Query 302539 TTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGC 302598
|||||| ||| |||| ||| || ||| || ||||| | | || | |||||||||
Sbjct 226603 TTTCTTGTGGTGTTATCGTAATGAACCATGATATCTTCTAGAGCTTTCACTAAACGACGT 226662
Query 302599 TGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCC 302658
||||||||||| ||| | |||||| || || ||||| || ||||| |||||||||||
Sbjct 226663 TGAATATAACCTGTTTCGGCTGTTTTGACGGCGGTATCGATAAGACCTTCACGACCACCC 226722
Query 302659 ATAGCATGGAAGAATAGCTCT--TCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGA 302716
|| |||||||| || | ||| | |||| | || | ||| | | ||| ||||||| |
Sbjct 226723 ATTGCATGGAAAAAAAATTCTTGTGGGGTC-AAACCTCTCAA-ATATGAGTTCTCAACAA 226780
Query 302717 AACC 302720
||||
Sbjct 226781 AACC 226784
>seq15
Length=1063911
Score = 84.2 bits (92), Expect = 6e-11
Identities = 110/150 (73%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898
||||| | |||||||||| ||||||||||| || || || || | || || |
Sbjct 593661 TGGGCAACAGTCATACGAGATGGAATAGCATGAGGGTTAATAATCAAATCTGGAACAATA 593720
Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAA-TGTTTCCAATAGTTCCCTTTTG 251957
|| || || || || |||||||| || || | ||| || | |||||||| ||||||||
Sbjct 593721 CCCTCTGCGGTAAATGGCATATC-TTCTCTACGATATGTGATACCAATAGTACCCTTTTG 593779
Query 251958 TCCGTGACGAGAACTGAACTTATCACCAAT 251987
|||||||||||| || || ||||||||
Sbjct 593780 ACCGTGACGAGAAGCAAATTTGTCACCAAT 593809
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471816996554784
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |