Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001669935.1_202016-06- 20] 17 sequences; 12,122,583 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq12 118 9e-22 seq9 84.2 2e-11 >seq12 Length=1077543 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| || ||||| ||||| ||||| |||||||| ||||| |||||||| ||| | Sbjct 498882 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 498823 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | |||| || |||||||||||| || || ||| | || | || ||||| || || Sbjct 498822 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 498763 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | ||||| ||||| || || || || | | ||| || || || ||| | Sbjct 498762 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 498703 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATTTT 20211 |||| |||||| || || ||||| || || ||||| ||||||||||| || Sbjct 498702 TCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 498653 Score = 105 bits (116), Expect = 6e-18 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| || |||||||||| || || |||||||| ||||| |||||||| || | Sbjct 64006 CCACCTCTCAATCTCAACACCANGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 64065 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| || |||||| | ||| || || ||| |||| | ||||||||||| || Sbjct 64066 AAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGG 64125 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | |||||||| || ||| || ||| || | | ||| || ||| || ||| Sbjct 64126 ATACCTTCTTTATCTTGAATNTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACC 64185 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || | ||| || || || || || | |||||||| ||||||||||| Sbjct 64186 TCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 64232 Score = 91.5 bits (100), Expect = 1e-13 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| || |||||||||||||| | ||||| ||||| || ||||| ||||| | Sbjct 64234 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 64293 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| || ||||||| ||| || || ||| | || | || |||||||| || Sbjct 64294 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAANATCAATCTTTGTTGATCTGGAGGA 64353 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | ||||| ||||| |||||| || || | | ||| || || || ||| Sbjct 64354 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACC 64413 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || | ||| || || || || || | || ||||| ||||||||||| Sbjct 64414 TCTAGGGTTATAGTCTTNCCTGTNAGNGTNTTGACNAAAATTTGCAT 64460 Score = 82.4 bits (90), Expect = 6e-11 Identities = 154/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| || ||| | ||| | ||||| || || || || || ||||||||||| | Sbjct 64690 CCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGAC 64749 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| | ||||| | || || || ||| | || | || |||||||| || Sbjct 64750 AGCGTTCTNCCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 64809 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | ||||| ||||| |||||| || || | | | | | |||| || ||| | Sbjct 64810 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACT 64869 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 |||| || |||||||| |||||||| || ||||| ||||| ||||| Sbjct 64870 TCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 64916 >seq9 Length=437786 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| || ||||| || || || | || ||||||||||| |||||||| || | Sbjct 68288 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 68229 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| || ||||||||||| || || ||| | || | || ||||| || || Sbjct 68228 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 68169 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | ||||| ||||| ||| ||| || || | | ||| || || || ||| | Sbjct 68168 ATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 68109 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAA 20200 |||| || ||||| || || ||||| || ||||||||| Sbjct 68108 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAAA 68070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419587113066777