Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001669935.1_202016-06- 20] 17 sequences; 12,122,583 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq9 105 6e-18 seq12 95.1 1e-14 >seq9 Length=437786 Score = 105 bits (116), Expect = 6e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 26778 TTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATC 26837 ||||| || || || ||||| || | ||||| | ||| | ||||| ||||| || Sbjct 68071 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 68130 Query 26838 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTC 26897 || | ||||| ||||||| ||||| ||||| || || || || ||||||||| | Sbjct 68131 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 68190 Query 26898 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAA 26957 || | | || || ||| | ||||| | ||||| | | ||||| |||||||||||| Sbjct 68191 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAA 68250 Query 26958 GAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| ||| | || | ||| ||||| | ||||| || Sbjct 68251 GAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGG 68288 >seq12 Length=1077543 Score = 95.1 bits (104), Expect = 1e-14 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || || || | || || || | || ||| | || | ||||| Sbjct 64460 ATGCAAATTTTNGTCAANACNCTNACAGGNAAGACTATAACCCTAGAGGTTGAATCTTCT 64401 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | || || || ||| ||||| ||||| || ||||| |||||| Sbjct 64400 GACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 64341 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 |||||| | || | | ||| || ||||| ||||| | ||||| | || |||||| Sbjct 64340 CAAAGATTGATNTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAAC 64281 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| ||||| ||||| | ||| |||| ||||| | ||||| || Sbjct 64280 ATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGG 64234 Score = 82.4 bits (90), Expect = 7e-11 Identities = 154/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || || || || || ||| | || || | ||| | ||||| | Sbjct 64916 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 64857 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || |||||||| | || || || ||| ||||| ||||| || ||||| |||||| Sbjct 64856 GATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAA 64797 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 |||||| | || | | ||| || || || ||||| | |||| | || || ||| Sbjct 64796 CAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGNAGAACGCTGTCTGATTACAAC 64737 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| || || || || | ||||| || || || || ||||| || Sbjct 64736 ATTCAGAAGGAGTCCACCTTACATCTTGTGCTAAGGCTAAGAGGTGG 64690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478662298284240