Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001669935.1_202016-06- 20] 17 sequences; 12,122,583 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq12 111 2e-19 seq9 95.1 1e-14 >seq12 Length=1077543 Score = 111 bits (122), Expect = 2e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||| | ||| | |||| || ||||| ||||| |||||||| || | Sbjct 64461 ACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGA 64520 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| | ||||||| |||||||| |||||| | || | || ||| || || ||||| Sbjct 64521 CAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAANATCAACCTCTGTTGATCTGGAGG 64580 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || ||||| || || || ||||| ||| || || | || || || || || Sbjct 64581 GATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCNAC 64640 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||| ||| | ||| || ||||||||||| || || || || ||||| Sbjct 64641 CTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 64688 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 64229 CTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCG 64288 || ||||| ||||| | || || || || |||||||||||||| | | || | || Sbjct 64702 CTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTNCCG 64761 Query 64289 TCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTT 64348 ||||| |||||||| |||||| | || | | || || || ||||| || ||||| || Sbjct 64762 TCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTG 64821 Query 64349 TCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACG 64408 ||||| ||||| ||| || || | ||||| | || ||||| | |||| | Sbjct 64822 TCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATG 64881 Query 64409 GTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || ||||||||||| || |||||||| ||||| Sbjct 64882 GTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 64916 Score = 102 bits (112), Expect = 8e-17 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||| | ||| | ||| | ||| || ||||| |||||||| ||||| | Sbjct 64233 ACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGA 64292 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || | ||||||| || ||||| |||||| | || | | || || || ||||| Sbjct 64293 CAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAANATCAATCTTTGTTGATCTGGAGG 64352 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || ||||| ||||| ||| || || | || ||| | || || Sbjct 64353 AATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAAC 64412 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||| |||| ||||| || || | || || || ||||||||||| Sbjct 64413 CTCTAGGGTTATAGTCTTNCCTGTNAGNGTNTTGACNAAAATTTGCAT 64460 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||| | ||| | |||| || ||||| ||||| |||||||| || | Sbjct 64005 ACCACCTCTCAATCTCAACACCANGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGA 64064 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| | | ||||| || ||||| || ||| |||| | | ||| || || ||||| Sbjct 64065 CAAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGG 64124 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || |||||||| ||||| || || || || || | || || | || || Sbjct 64125 GATACCTTCTTTATCTTGAATNTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAAC 64184 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||| |||| ||||| || || | |||||| |||||||||||||| Sbjct 64185 CTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 64232 Score = 87.8 bits (96), Expect = 2e-12 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | ||| || | || || |||| || || || |||||||| ||||| || | Sbjct 63777 ACCACCCCTCAACCTCAAGACNAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGA 63836 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || | | ||||| || || || |||||| | || | | |||||||| ||||| Sbjct 63837 CAGCGTTCTACCATCTTCTAGTTGNTTACCGGCAAANATCAATCTTTGCTGGTCTGGAGG 63896 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || ||||| ||||| || || || | || ||| | || || Sbjct 63897 AATACCTTCCTTGTCTTGAATTTTNGANTTAACGTTGTCAATAGTGTCAGAAGATTCAAC 63956 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||| |||| ||||| || |||| || || || ||||||||||| Sbjct 63957 CTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACNAAAATTTGCAT 64004 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||| | || | || | || ||||| ||||| |||||||| || | Sbjct 498883 ACCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGA 498824 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || | | ||||| | ||||| || ||| | || | | || ||||| || || Sbjct 498823 CAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 498764 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || ||||| || || ||| ||| || | || ||| | || || Sbjct 498763 AATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 498704 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 ||| | || | ||||| ||||| ||||| || |||||||||||||| || Sbjct 498703 TTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 498653 >seq9 Length=437786 Score = 95.1 bits (104), Expect = 1e-14 Identities = 153/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||| | |||| || | || |||||||||||||||||||| || | Sbjct 68289 ACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGA 68230 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| | ||||||| | ||||| || ||| | || | | || ||||| || || Sbjct 68229 CAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 68170 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || ||||| || ||||| || ||| ||| ||| || | || ||| | || || Sbjct 68169 GATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 68110 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAA 64435 ||| | ||| | |||||| || |||||||| || || ||| Sbjct 68109 TTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAAA 68070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644693825480