Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001669935.1_202016-06- 20] 17 sequences; 12,122,583 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq5 181 3e-40 seq9 147 6e-30 seq13 131 5e-25 seq4 102 2e-16 seq15 84.2 6e-11 >seq5 Length=573874 Score = 181 bits (200), Expect = 3e-40 Identities = 507/772 (66%), Gaps = 16/772 (2%) Strand=Plus/Minus Query 155592 GACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTG--TATTCTACAATCTCACAGC 155649 || |||| ||||| || ||||| || | | |||| ||||| ||||| ||||||| Sbjct 297625 GAAGCCAAGTTACAAACAGCAGTTTCATCT--GGAGCTGANTATTCAACAATTTCACAGC 297568 Query 155650 ACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGCAT 155709 | | ||| || ||||||| ||||| || || || |||||||| ||||||||||||| Sbjct 297567 ATAAGTTTGATGACTTGATGACACCTAAGTTTTTTTGATTAGATTTTCTGTTACAAGCAT 297508 Query 155710 CCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGCCAGA 155769 ||||||| | || | | || || || || || | || || |||| ||| ||| | Sbjct 297507 CCTTGTAAACAACGAAAGGTGTACCAGTTTCAGTTTGAGCTTCCAAAATGGAATACCATA 297448 Query 155770 GGTCACGGGCATTAATTTGCTTGTTGTATCTG--CCTTCCGACTCATATTTCATATACAG 155827 | |||| |||| | || || | ||||| ||| || |||| || Sbjct 297447 ATTTTTGGGC-----TTTGATAGTCTTACCACGACCTTCTTTCTCGTAGCGGGTATATAG 297393 Query 155828 CGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGG-GCACTTATCGGGGCAAAACA 155886 | | || |||||||||||||| || | ||||| || | | || | | || | Sbjct 297392 AGCCTCAAACTCGTCACCGTAACAATCGCTTAAACCAGGAGCTGATGTTGGAG-AGAATA 297334 Query 155887 GCGACCAAATTTTATTACCGATTACACGCTCCATAAATACATCACTCGCCCAAATAGCAT 155946 | ||| | ||| | ||||||| ||| || | |||| ||| | |||| Sbjct 297333 ATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAG 297274 Query 155947 AGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATT 156006 ||| | || ||||| ||||| | ||||| ||||||| | || | || | Sbjct 297273 GGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTGGTTCTTCCTAATATCAATAAAAT 297214 Query 156007 CCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTCTTG---C 156063 | ||||||| ||| ||| ||||| || | ||||| |||| || || | Sbjct 297213 CAAATATATCAGCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAGGTCTTTTATTAC 297154 Query 156064 CACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCAT 156123 ||||||| || ||||| || ||||| |||||||| |||| | ||||||||| | ||| | Sbjct 297153 CACCCTGGTCAACATAACGGGCAGTGTTATTGAAAACACGAATCATAGGAATTAAACCGT 297094 Query 156124 TGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATATGTA 156183 | ||||| || || || || ||| | ||||||| ||| |||| ||||| ||||||| Sbjct 297093 TAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTA 297034 Query 156184 GTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATAC 156243 | ||||||||||| | ||| ||||| ||| |||||||| | || | | |||| | Sbjct 297033 GACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAGGTGTCGTAAATCC 296974 Query 156244 CTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTG 156303 | || ||||| || || | ||| | | | | || || | ||||||| ||| | Sbjct 296973 CCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAACAAGAGGACATTTGAGGTTTTGGAG 296914 Query 156304 TTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACAT 156355 | || || ||||| | || || | || ||| ||||||| || |||||| Sbjct 296913 TACCGGCATTGAACAACGTTGGAGAGGCGTGAGTAAAATATTTTAGAGACAT 296862 >seq9 Length=437786 Score = 147 bits (162), Expect = 6e-30 Identities = 240/341 (70%), Gaps = 6/341 (2%) Strand=Plus/Plus Query 156012 ATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTCTTG---CCACCC 156068 ||||| | ||| |||||||| | | || ||| |||| |||||| |||||| Sbjct 238706 ATATCTGCATGCCATGGCTCCAAGAAAAGGGCGAAAGCACCAGGTCTCTTGTTACCACCC 238765 Query 156069 TGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAA 156128 || || ||||| || ||||| |||||||| |||| | ||||||||| | || || ||| Sbjct 238766 TGGTCCACATAACGGGCAGTATTATTGAAAACACGAATCATAGGAATCAACCCGTTTGAA 238825 Query 156129 GTGCCATTGGTTCC-GCGAATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCC 156187 || || ||||| || |||| ||| ||||| | || || | || | ||||| || || Sbjct 238826 GTACCGTTGGTACCAGCGA-TATAAGAACCTGTGGAACGGATGTTGTTGATATGAAGACC 238884 Query 156188 AATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTC 156247 || |||||||| ||| ||||| ||| ||||| || | ||||| |||||||||| Sbjct 238885 AACACCACCTGCAGTTTTGGAAATCATAGCACATTCTTTCAAAGTATCATAAATACCTTC 238944 Query 156248 AATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCC 156307 ||||| ||||| | ||| | | || | || ||| | |||||| |||| || || Sbjct 238945 GATAGAGTCATCCTTCATGGCAATTAAGAAACATGAAGACATTTGAGGATGTGGCGTACC 239004 Query 156308 AGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATA-CTTA 156347 ||||||||||| || || | || ||| | || || |||| Sbjct 239005 AGCGTTGAATAAAGTTGGGGAAGCGTGAGTGAAGTATCTTA 239045 >seq13 Length=922709 Score = 131 bits (144), Expect = 5e-25 Identities = 256/378 (68%), Gaps = 3/378 (1%) Strand=Plus/Plus Query 288849 CCTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGC 288908 ||| ||||| ||||||| | ||||||| || | ||||||| ||| || || | Sbjct 446106 CCTGTCAAATCTACCAGGCCTTAATAATGCTTTATCGAGAATATCGGGTCTATTGGTACC 446165 Query 288909 TGCCAATACAACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGATT 288968 || || ||||||| || | | | | || |||||||| | ||| |||||||| Sbjct 446166 AGCTAAAACAACAACGTGGTCAGCTGGAGTGAAACCATCCATTTCTACTAACATTTGATT 446225 Query 288969 AAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCttttttt 289028 || || | || || |||||||| | |||| ||| |||| | || |||| Sbjct 446226 TAGCGTGTTCTCTCTCTCATCATTGGCACCTGAAAAATTACCCTTTTGTCTTGCTTTT-- 446283 Query 289029 ACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGC 289088 || | |||||||||||||||||| || | | | || | ||||| ||| ||| || Sbjct 446284 -CCTATAGCATCAATTTCGTCAATAAACACAATCGAGGGTGCATTTTCTCTTGCAGTTTT 446342 Query 289089 AAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGC 289148 || || |||||||| | | ||| |||| ||||||| |||||||||||||||| ||| | Sbjct 446343 GAACAAATCTCTTACTCTTGCTGCACCAACACCAACAAACATTTCTACAAATTCTGAACC 446402 Query 289149 GGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTT 289208 || || | || | ||| ||||| |||||| |||| | || || | || || Sbjct 446403 AGAAACAAAATAAAACGGAACACCGGCTTCACCTGCTGTTGCCTTTGCAAGCAAAGTTTT 446462 Query 289209 ACCTGTTCCAGGTGGTCC 289226 ||| || || ||||| || Sbjct 446463 ACCGGTACCTGGTGGACC 446480 >seq4 Length=1531424 Score = 102 bits (112), Expect = 2e-16 Identities = 135/184 (73%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 302539 TTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGC 302598 |||||| ||| |||| ||| || ||| || ||||| | | || | ||||||||| Sbjct 207826 TTTCTTGTGGTGTTATCGTAATGAACCATGATATCTTCTAGAGCTTTCACTAAACGACGT 207885 Query 302599 TGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCC 302658 ||||||||||| ||| | |||||| || || ||||| || ||||| ||||||||||| Sbjct 207886 TGAATATAACCTGTTTCGGCTGTTTTGACGGCGGTATCGATAAGACCTTCACGACCACCC 207945 Query 302659 ATAGCATGGAAGAATAGCTCT--TCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGA 302716 || |||||||| || | ||| | |||| | || | ||| | | ||| ||||||| | Sbjct 207946 ATTGCATGGAAAAAAAATTCTTGTGGGGTC-AAACCTCTCAA-ATATGAGTTCTCAACAA 208003 Query 302717 AACC 302720 |||| Sbjct 208004 AACC 208007 >seq15 Length=1079314 Score = 84.2 bits (92), Expect = 6e-11 Identities = 110/150 (73%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898 ||||| | |||||||||| ||||||||||| || || || || | || || | Sbjct 601946 TGGGCAACAGTCATACGAGATGGAATAGCATGAGGGTTAATAATCAAATCTGGAACAATA 602005 Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAA-TGTTTCCAATAGTTCCCTTTTG 251957 || || || || || |||||||| || || | ||| || | |||||||| |||||||| Sbjct 602006 CCTTCTGCGGTAAATGGCATATC-TTCTCTACGATATGTGATACCAATAGTACCCTTTTG 602064 Query 251958 TCCGTGACGAGAACTGAACTTATCACCAAT 251987 |||||||||||| || || |||||||| Sbjct 602065 ACCGTGACGAGAAGCAAATTTGTCACCAAT 602094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471817279419729