Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001670145.1_202016-06-
20] 17 sequences; 12,136,761 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq9 205 2e-47
seq5 197 4e-45
seq15 122 2e-22
>seq9
Length=438001
Score = 205 bits (226), Expect = 2e-47
Identities = 1070/1681 (64%), Gaps = 49/1681 (3%)
Strand=Plus/Minus
Query 363364 TATGAGAAGGATCTCGAGTATGATATTTTCGGATATAAGACGATGGAGAAATCCTACCTA 363423
|| || | |||| || ||||| |||||||| ||||| ||||| || ||| |
Sbjct 238984 TACGATAGGGATTTCCAGTATACGTATTTCGGATTCAAGACACTGGAGCGTTCGTACTTG 238925
Query 363424 TCTCGTATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATT 363483
| | || ||||| | | ||||| || |||||| || |||||||||| || |
Sbjct 238924 CTAAGACTGAACGGTGAAGTGGCAGAACGTCCTCAGCATTTGGTAATGCGTGTGGCGCTA 238865
Query 363484 GGTATCCATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGT 363543
||||||||| | ||| | || | | | | | || ||||| || | || |
Sbjct 238864 GGTATCCATGGTAGCGATATCGAATCTGTGCTGAAGACTTATAA--TTTGATGTCGTTAA 238807
Query 363544 G-TA-TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGT 363601
| || ||||| ||||| | ||||| | | ||| ||||| || | |||| || ||||
Sbjct 238806 GATACTTCACTCACGCTTCCCCAACTTTATTCAACGCTGGTACGCCACATCCTCAAATGT 238747
Query 363602 CTTCTTGCTTTCTTC-TAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTT 363660
|||| || |||||| | |||||||| || || ||||| ||||| | ||| || |
Sbjct 238746 CTTCATG-TTTCTTAATTGCCATGAAGGATGACTCTATCGAAGGTATTTATGATACTTTG 238688
Query 363661 AAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTT 363720
|| | |||||| | |||||||| | |||||| || ||||| | ||| |||| |
Sbjct 238687 AAAGAATGTGCTATGATTTCCAAAACTGCAGGTGGTGTTGGTCTTCATATCAACAACATC 238628
Query 363721 CGTGC-ACAGAACAGTTACATTCGC-GGCACAGGGGGATACT-CGAATGGGCTGGTTCCC 363777
||| | |||| ||| || ||| || || || |||| | || ||| || ||||
Sbjct 238627 CGTTCCACAGGTTC-TTATAT-CGCTGGTACCAACGG-TACTTCAAACGGGTTGATTCCT 238571
Query 363778 ATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAA 363837
||| ||||||| || | |||||||| | || || ||||||||||| ||| |
Sbjct 238570 ATGATTCGTGTTTTCAATAATACTGCCCGTTATGTGGACCAGGGTGGTAACAAGAGACCT 238511
Query 363838 GGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTC 363897
|| || || || | | | ||||| ||||| ||||| || || ||| | || ||
Sbjct 238510 GGTGCTTTCGCCCTTTTCTTGGAGCCATGGCATGCAGATATCTTCGACTTTGTCGATATC 238451
Query 363898 CGGAAAAACACG-GGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGT 363956
| |||||||| || || || ||| | |||||| | ||| ||||| ||| || ||| |
Sbjct 238450 AG-AAAAACACATGGTAAGGAAGAAATTCGTGCAAGAGATTTGTTCCCTGCTCTATGGAT 238392
Query 363957 TTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACA 364016
|||| | ||| ||||| || || | | || | | |||| | | |||| || ||
Sbjct 238391 CCCTGATCTTTTCATGAAACGTGTTCAAGAAGATGGGCCTTGGACTTTGTTTTCGCC-CA 238333
Query 364017 CGAATGTCC-AGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGT 364075
|| || |||| | ||||| |||||||| || | || | ||||| |
Sbjct 238332 GTGCTGCCCCAGGTTTAGATGATGTGTGGGGTGATGAATTTGAAGAACTATATACTCGTT 238273
Query 364076 ATGAATCGGAGGGAAAGGC-TCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATC 364134
| ||| || ||| | | | |||| |||||| || || ||| | |||| ||||||
Sbjct 238272 ACGAA----AGAGAAGGTCGTGGTAAAACAATTAAAGCCCAAAAGTTGTGGTATGCCATT 238217
Query 364135 ATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGC 364194
|| | |||||| || ||||| ||||| | ||| | || || || | || ||| |
Sbjct 238216 TTGCAAGCGCAGACAGAAACAGGTACACCTTTCATGGTTTATAAGGACGCATGTAACAGG 238157
Query 364195 AAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGC-AACCTATGTACCGAGATTAT 364253
||| | ||||| ||| || | ||||| || || | | || ||||| || || |
Sbjct 238156 AAGACAAACCAACAGAACTTAGGTACTAT-CAAATCATCTAATTTATGTTGTGAAATCGT 238098
Query 364254 TGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGC 364313
||||| || | || || || ||||| || ||||| | || || || || || || ||
Sbjct 238097 CGAATATTCCTCCCCGGATGAAACTGCAGTTTGTAATTTAGCTTCTATTGCCCTACCAGC 238038
Query 364314 GTTTGT---------AAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAAC--- 364361
|| || | ||||||||| || | | || | | || | ||
Sbjct 238037 ATTCGTTGAGGTTTCAGAAGATGGTAAAACTGCAAGCTATAATTTCGA-GAGATTACACG 237979
Query 364362 ------CTA---TCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCC 364412
||| |||| |||| ||| | ||| ||||||||| ||||| |||||
Sbjct 237978 AGATTGCTAAAGTCAT--TACTCACAACTTGAACAGAGTTATCGACCGTAATTACTATCC 237921
Query 364413 AATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGG 364472
| |||| || || ||| |||||| ||| | || |||| ||||||||| |||||
Sbjct 237920 AGTTCCCGAGGCTAGAAATTCAAATATGAAGCATAGACCTATTGCTCTTGGTGTCCAGGG 237861
Query 364473 CCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCT 364532
| || || || ||||||| | | | ||||| ||| | |||| |||
Sbjct 237860 TTTGGCCGATACTTATATGATGTTGCGTCTACCCTTTGAATCGGAAGTAGCTCAAACTCT 237801
Query 364533 AAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGC 364592
||| || | ||||| ||||| || || ||| | | || || ||||| |||||
Sbjct 237800 AAACAAACAAATCTTCGAAACTATTTACCATGCTACTCTTGAAGCCTCCTGTGAATTGGC 237741
Query 364593 A-AAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCC 364651
|||| |||| ||| || ||||||| ||| || || || ||| |||| | || |
Sbjct 237740 CCAAAAAGAAGGTAAA-TATTCTACTTTTGAAGGTTCTCCAGCTTCTAAGGGTATTTTAC 237682
Query 364652 AGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCA 364711
| || ||| | ||||| | | |||| || | ||| | ||||| || || |
Sbjct 237681 AATTCGATATGTGGAACGCTAAACCATTTGGCATGTGGGATTGGGAAACCTTAAGAAAGG 237622
Query 364712 ACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTA 364771
|| || || ||||| | ||||| | || || || ||||| || || || |
Sbjct 237621 ACATTGTTAAACATGGGTTAAGAAACTCTTTGACTATGGCACCAATGCCAACCGCCTCAA 237562
Query 364772 CTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCAC 364831
|| | || || || || | || || ||||||||||| | || || | || || |
Sbjct 237561 CTTCCCAAATTCTTGGTTATAATGAATGCTTCGAACCAGTGACCTCAAACATGTACTCTC 237502
Query 364832 GCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCG 364891
| || || || || || ||||| | || |||||| || || | ||| | ||
Sbjct 237501 GTCGTGTCCTGTCTGGTGAATTCCAAGTTGTTAATCCATATTTACTACGTGATTTAGTCG 237442
Query 364892 ACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGC 364951
||| || | |||| ||| || ||||| | ||| | || | ||||||||| | |
Sbjct 237441 ACCTGGGTATTTGGGATGATAGTATGAAACAATATCTAATTACACAAAATGGTTCTATTC 237382
Query 364952 AGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTT 365011
| | | ||| | ||| |||| ||||| | ||||||||||| |||||||| |
Sbjct 237381 AAGGCTTACCAAATGTGCCACAAGAATTGAAGGAACTATACAAAACCGTCTGGGAAATCT 237322
Query 365012 C 365012
|
Sbjct 237321 C 237321
>seq5
Length=575084
Score = 197 bits (218), Expect = 4e-45
Identities = 698/1076 (65%), Gaps = 57/1076 (5%)
Strand=Plus/Plus
Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606
|| || |||||| | ||||| ||| |||||| || |||| || || || ||||| |||
Sbjct 298332 TTTACTCACGCCTCTCCAACGTTGTTCAATGCCGGTACTCCAAAACCTCAAATGTCCTCT 298391
Query 363607 TGCTTTCTTC-TAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAA 363665
|| |||||| | |||||||| || || |||||||| || | ||||| | ||| |
Sbjct 298392 TG-TTTCTTGGTTGCCATGAAGGAGGACTCTATCGAGGGGATTTACGACACCTTGAAGGA 298450
Query 363666 TTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC 363725
|||||| | |||||||| | ||| || || |||||| || ||||| || ||||| |
Sbjct 298451 ATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGTCTACATATCCATAACATTCGTTC 298510
Query 363726 ACAGAACAG----TTACATTCGCGGCACAGGGGGATACT-CGAATGGGCTGGTTCCCATG 363780
| || | ||||||| || ||| || |||| | || || | |||| |||
Sbjct 298511 A----ACTGGTTCTTACATTGCTGGTACAAACGG-TACTTCTAACGGTTTAATTCCTATG 298565
Query 363781 CTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGG--AGGAAAGCGCAAAG 363838
||||||| || | || ||||| | || || ||||||||||| | |||| | |
Sbjct 298566 ATTCGTGTTTTCAATAACACTGCCCGTTATGTTGACCAGGGTGGTAATAAAAGACC--TG 298623
Query 363839 GGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCC 363898
| |||||||| | || || || || ||||| ||||| ||||| ||| |||| |
Sbjct 298624 GTGCGTTTGCCCTTTACCTGGAACCATGGCATGCTGATATATTTGATTTTATTGATATTA 298683
Query 363899 GGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTT 363958
|||| ||| || ||||||||| | |||||| | ||| ||||| ||| || ||| ||
Sbjct 298684 GGAAGAACCACGGTAAAGAGGAAATTCGTGCAAGAGATTTGTTCCCTGCTCTATGGATTC 298743
Query 363959 CTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACG 364018
|||| | ||| |||||||| || || | | | || ||| || | || | |||
Sbjct 298744 CTGATCTTTTCATGAAGCGTGTCGAAGAAAATGGGACCTGGACATTATTCTCTCCAACAT 298803
Query 364019 AATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATG 364078
| ||| ||| | |||| | |||||||| | || |||||||| || |
Sbjct 298804 CAGCTCCTGGTTTAAGCGATTGTTACGGTGACGAGTTTGAGGCTCTATATACCCGCTACG 298863
Query 364079 AATCGGAGGGAAAGGC-TCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATG 364137
| || ||| | | | ||||||| || || || || |||||| | |||| ||
Sbjct 298864 A----GAAAGAAGGTCGTGGTAAGACTATCAAAGCCCAAAAATTATGGTATTCCATTTTG 298919
Query 364138 GATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAG 364197
|| | || | ||| || || ||||| | | | ||||| ||| | || ||| | ||
Sbjct 298920 GAAGCTCAAACTGAAACTGGTACACCTTTCGTTGTTTACAAGGATGCTTGTAACAGAAAA 298979
Query 364198 TCCAACCAGCAGCACCTTGGT----ACAATTCAGCAGAGCAACCTATGTACCGAGATTAT 364253
|| || || | || | ||| ||| ||| || ||| |||| || ||| |
Sbjct 298980 TCTAATCAAAAAAACTTAGGTGTCATCAAGTCATCA----AACTTATGCTGTGAAATTGT 299035
Query 364254 TGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGC 364313
||||||| | ||||| || || ||||| || |||||| | || || | || | || ||
Sbjct 299036 TGAATACTCAGCTCCAGATGAAACTGCTGTTTGTAACTTGGCTTCCGTTGCCTTACCAGC 299095
Query 364314 GT---TTGTAA------AAGATGGT---ACTTTTGACCAC---CAGCATC-------TTT 364351
| ||| || | |||||| |||| |||| || | || |
Sbjct 299096 ATTCATTGAAACTTCTGAGGATGGTAAGACTT----CCACATACAACTTCAAAAAATTAC 299151
Query 364352 ATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATC 364411
|||| | | | || |||| | ||| | ||| || || || ||||| || |
Sbjct 299152 ATGAAATTGCTAAAGTTGTTACTCGTAATTTAAACAGAGTCATTGATCGTAATTACTACC 299211
Query 364412 CAATTCCTGAAGCCGAG-CGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAG 364470
| || |||| |||| || |||||| | ||| | || |||| | | ||||| ||
Sbjct 299212 CTGTTGAAGAAG-CGAGAAAATCCAATATGAGACATAGACCAATTGCTTTGGGTGTTCAA 299270
Query 364471 GGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTT 364530
|| ||||||||| ||| ||| || | || |||||||||| || || ||| |
Sbjct 299271 GGTCTCGCTGACACTTTCATGCTGTTACGTTTGCCATTTGATTCTGAGGAAGCCCGTTTG 299330
Query 364531 CTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGA 364586
||||||| | ||||||||||| || ||| |||| | ||| ||||| |||||
Sbjct 299331 CTAAATATCCAAATCTTTGAAACTATTTATCATGCCTCCATGGAAGCTTCTTGTGA 299386
>seq15
Length=1089902
Score = 122 bits (134), Expect = 2e-22
Identities = 339/515 (66%), Gaps = 34/515 (7%)
Strand=Plus/Minus
Query 111419 TGTAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTC-G 111477
||| || |||||||| || |||||||| ||||| | | ||||| || ||| || |
Sbjct 466278 TGTTAAGATTTGGGACGGTAATGGATCTCGTGAATATTTAGATA-AGATGGGGTTCAAAG 466220
Query 111478 ACAACGAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAG 111537
| | ||| ||| ||||| || || ||||| |||||||||||| | || ||||||||
Sbjct 466219 ATAGGAAAGTAGGAGATCTGGGGCCCGTTTATGGATTTCAATGGAGGCATTTTGGTGCTA 466160
Query 111538 ACTACAAAACCATGC-ACGACTCATATGATTCACAGGGAACTGATCAATTACAGAATGTC 111596
| ||||| || ||| | ||| ||| | ||| || | ||||||||| | | ||
Sbjct 466159 AATACAAGACG-TGCGATGACGACTATACTGGACAAGGTATTGATCAATTGAAACAGGTT 466101
Query 111597 ATTGATCAAATTAAGAACAA-CCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCC 111655
||| || || | |||| || ||| || | | | || ||||||||||| ||||||||
Sbjct 466100 ATTCATAAACTAAAGACAAATCCCTACGA-TAGAAGAATCATTATGAGTGCCTGGAACCC 466042
Query 111656 AAATGCATTGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATG---- 111711
| || || || |||||||| | || ||||| ||| || | | ||||| ||||
Sbjct 466041 AGCTGATTTTGACAAAATGGCTTTGCCGCCATGCCATATTTTTTCACAGTTCTATGTCAG 465982
Query 111712 --TACACGACG--------GGAT-------------GCTTTCATGCCAAATGTATCAGCG 111748
| | | | | |||| ||||||||| | |||| || ||
Sbjct 465981 TTTCCCCAAAGAAGGAGAAGGATCCGGTAAGCCCCGCCTTTCATGCTTATTGTACCAACG 465922
Query 111749 ATCTGCTGATATTGGTCTTGGTGTTCCGTTTAATATTGCAAGTTACGCACTACTTACTTG 111808
||| |||||| || | || || || ||||| |||||| || || | | ||| |
Sbjct 465921 TTCTTGTGATATGGGGTTGGGAGTACCATTTAACATTGCATCATATGCTTTGTTGACTAG 465862
Query 111809 CTTAATCGCTCATTTTACAAATCTCAAACCGGGTGAATTCATTCACGTTATCGGAGATGC 111868
| || ||| | || | | | || ||||| |||||||| | | || |||||
Sbjct 465861 AATGATTGCTAAAGTTGTCGACATGGAGCCAGGTGAGTTCATTCATACTTTGGGGGATGC 465802
Query 111869 GCATGTTTACACAAACCACATTGATGCACTTAAAA 111903
|||||||| | | ||||||||||||| ||| |||
Sbjct 465801 ACATGTTTATAAAGACCACATTGATGC-CTTGAAA 465768
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303353316113294
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