Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001670235.1_202016-06-
20] 17 sequences; 12,121,746 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq12 102 7e-17
seq9 89.7 5e-13
>seq12
Length=1075190
Score = 102 bits (112), Expect = 7e-17
Identities = 161/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | || || ||||| |||| || || | || || | || || ||| | |
Sbjct 64190 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 64131
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| ||||| || | || ||| || ||| |||||||| ||||| || || |||||
Sbjct 64130 GACACTATTGACAACGTCAAAAGTAANATTCAAGATAAAGAAGGTATCCCTCCGGATCAA 64071
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACA 25352
|| ||| | |||| | || || ||||| ||||||| ||||| |||| | | ||||
Sbjct 64070 CAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTG--ACTACA 64013
Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
| || ||||| ||||| || |||| | ||||| ||||||||||| ||
Sbjct 64012 ACATCCAAAAGGAATCTACTCTTCACCTGGTGTTGAGATTGAGAGGTGG 63964
Score = 98.7 bits (108), Expect = 9e-16
Identities = 167/242 (69%), Gaps = 4/242 (2%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | || || || || |||| || || | || || | || || ||| |
Sbjct 63962 ATGCAAATTTTCGTCAAGACTCTAACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 63903
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| ||||| || | || || |||||| || || || ||||| || || || |||
Sbjct 63902 GACACTATTGACAACGTTAANTCNAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 63843
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACA 25352
|||||| | || | | ||| || ||||| ||||||| ||||| |||| | | ||||
Sbjct 63842 CAAAGATTGATNTTTGCCGGTAANCAACTAGAAGATGGTAGAACGCTGTCGG--ACTACA 63785
Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAAAATGATCAT 25412
|||||||||| || ||||| |||| | || || || ||||| || || || ||||||
Sbjct 63784 ATATTCAAAAGGAGTCCACTCTTCACCTNGTCTTGAGGTTGAGGGGTGGTAACTGATCAG 63725
Query 25413 TC 25414
||
Sbjct 63724 TC 63723
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
||||| | ||||| || || || ||||| ||| | ||||| | || || ||| || |
Sbjct 64646 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTNGAATCCTCC 64587
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| || ||||| | || || ||||| || || || ||||| || || |||||
Sbjct 64586 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAA 64527
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACA 25352
|| || | || | | ||| || || || ||||| | ||||| |||| | | ||||
Sbjct 64526 CAGAGGTTGATNTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTG--ACTACA 64469
Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
| || ||||| ||||| || |||| || ||||| ||||||||||| ||
Sbjct 64468 ACATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 64420
Score = 89.7 bits (98), Expect = 5e-13
Identities = 158/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | || || || ||| | || || || | || || | || || ||| |
Sbjct 64418 ATGCAAATTTTNGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 64359
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| ||||| || | || || |||||| || || || ||||| || || |||||
Sbjct 64358 GACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 64299
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACA 25352
|||||| | || | | ||| || ||||| ||||| | ||||| |||| | |||| |
Sbjct 64298 CAAAGATTGATCTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTG--ATTATA 64241
Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
| ||||| ||||| || || | ||||| ||||| ||||||||||| ||
Sbjct 64240 ACATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGG 64192
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230
||| |||||| | || || || || |||||||| || | || || | ||||| ||| |
Sbjct 498610 CAAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATC 498669
Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290
|| ||||| || | || || || || || || || ||||| || || ||
Sbjct 498670 TTCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGA 498729
Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTA 25350
|| |||||| | || | | || || ||| | ||||||| ||||| | | ||| ||
Sbjct 498730 CCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTA 498789
Query 25351 CAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
||| || ||||| ||||| || | || || || || ||||||||||| ||
Sbjct 498790 CAACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 498840
>seq9
Length=438784
Score = 89.7 bits (98), Expect = 5e-13
Identities = 153/220 (70%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 25184 TTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAACGATACTATC 25243
||||| || || || || || || | ||||| | ||||| ||| | || |||||
Sbjct 68458 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 68517
Query 25244 GAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTC 25303
|| | || || ||| ||| || || || ||||| || || || || |||||| |
Sbjct 68518 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 68577
Query 25304 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACAATATTCAAA 25361
|| | | || || ||| | ||||| | ||||| |||| | | ||||| |||||||
Sbjct 68578 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTG--ACTACAACATTCAAA 68635
Query 25362 AAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
|||||||||| | || ||||| || ||||||||||| ||
Sbjct 68636 AAGAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGG 68675
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445094305417440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |