Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001670325.1_202016-06- 20] 17 sequences; 12,131,042 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq12 150 1e-31 seq11 93.3 3e-14 >seq12 Length=1077582 Score = 150 bits (166), Expect = 1e-31 Identities = 178/236 (75%), Gaps = 4/236 (2%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||||| ||||||||||| |||||| || ||||||||||||||||| Sbjct 64464 TTGCATACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTA 64523 Query 44164 ATCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222 || | | || | | |||| || |||||||| |||||||||||||| | ||| |||| Sbjct 64524 GTCAGACAAGGTTCTAC-CGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGAT 64582 Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCG 44281 ||| ||| | ||||||||| ||| || ||| ||| || ||| | || ||||||| | Sbjct 64583 CTGGAGGGATACCTTCCTTGTCCTGGATTTTCGACTT-AACGTTATCGATCGTGTCGGAG 64641 Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| ||||| | || || || || || || | ||||| || ||||| ||||| Sbjct 64642 GATTCAACCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 64697 Score = 120 bits (132), Expect = 2e-22 Identities = 167/234 (71%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||||| ||||||||||| || | ||| ||| || || ||||| || Sbjct 64236 TTGCATACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATA 64295 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| | || | |||| ||||| ||||| |||||||| ||||| | || ||||| Sbjct 64296 ATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATC 64355 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 || ||| | ||||||||| || || ||| ||| | | | || ||||||| || Sbjct 64356 TGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTGACGTTGTCAATAGTGTCGGAAGA 64415 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| ||||| | || || ||||| || || || || || ||||| |||||||| Sbjct 64416 TTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 64469 Score = 118 bits (130), Expect = 8e-22 Identities = 172/237 (73%), Gaps = 6/237 (3%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||||| ||||||||||| |||||| || ||||||||||||||||| Sbjct 64008 TTGCATACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTA 64067 Query 44164 ATC-GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222 || | | || | | | || || || ||||| || ||||| ||||| | ||| |||| Sbjct 64068 GTCAGACAAGGT-TCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGAT 64126 Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTT-CTGCTTCAATGTT-CCTATGGTGTCGGC 44280 | | ||| | |||||| || || ||||| || || | ||| | || ||||||| Sbjct 64127 CCGGAGGGATACCTTCTTTATCTTGAATCTTACT--TTTGACGTTGTCAATAGTGTCGGA 64184 Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| ||||| | || || ||||| || || || || || ||||| |||||||| Sbjct 64185 AGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 64241 Score = 114 bits (126), Expect = 9e-21 Identities = 168/235 (71%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||| || || | ||| || || | ||| |||||| || ||||||||||| Sbjct 64695 CATACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATC 64754 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || | |||| || |||||||| |||||||||||||| | || ||||||| Sbjct 64755 AGACAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGG 64814 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATT 44285 ||| | ||||||||| || || ||| ||| || ||| | ||||| |||| |||| Sbjct 64815 AGGGATACCTTCCTTGTCTTGAATTTTCGACTT-AACGTTGTCGATGGTATCGGAAGATT 64873 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGAT 44340 | || |||| || || || || || || | ||||| ||||| || ||||| || Sbjct 64874 CAACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATAAT 64928 Score = 109 bits (120), Expect = 4e-19 Identities = 165/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || ||||||| |||||| |||| ||| || || ||||||||||||||||| |||| Sbjct 498891 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 498832 Query 44171 A--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 | ||| | | || |||| ||||| || ||||||||||| | || || || | | Sbjct 498831 AAAGTT--CTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 498774 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTC 44286 | | ||||||||| || ||||| ||| || ||| | || ||||| | ||||| Sbjct 498773 GAATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGT--CAATAGTGTCAGAAGATTC 498716 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || |||| ||||| ||||| || || | ||||| ||||| |||||||| Sbjct 498715 AACTTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 498665 >seq11 Length=665961 Score = 93.3 bits (102), Expect = 3e-14 Identities = 156/224 (70%), Gaps = 4/224 (2%) Strand=Plus/Plus Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167 || || ||||| | |||||| |||| || | ||| ||||||||||||||||| || Sbjct 617469 ATACCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCA 617528 Query 44168 G--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225 | ||||| | |||| |||| ||||| || ||||||||||| | || || || | Sbjct 617529 GATAGAGTT--CTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAG 617586 Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATT 44285 || | ||||||||| || ||||| ||| | | | |||||||| | |||| Sbjct 617587 GTGGGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTATCAATGGTGTCAGAAGATT 617646 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAG 44329 | || |||| || || ||||| || || | ||||| |||||| Sbjct 617647 CAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAAG 617690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990325414489