Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001670355.1_202016-06-
20] 17 sequences; 12,085,481 total letters
Query= NC_023426.1
Length=245717
Score E
Sequences producing significant alignments: (Bits) Value
seq12 127 3e-24
seq9 107 3e-18
>seq12
Length=1077384
Score = 127 bits (140), Expect = 3e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| ||| | ||||| ||||||| || || || || | || || ||| | ||
Sbjct 64314 TGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCCG 64255
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| |||||| | || || || ||||| ||| || ||||| ||||| || |||||||
Sbjct 64254 ACACTATTGACAACGTCAAGTCAAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAAC 64195
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
||||| | |||||||| ||||| ||| | || || ||||||| | | |||||||| |
Sbjct 64194 AAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAACA 64135
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
| || ||||| || || | ||||| || || |||| ||||| ||||
Sbjct 64134 TTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGGTA 64087
Score = 87.8 bits (96), Expect = 3e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| || ||| | || || || || || ||||| || || | || || ||| | ||
Sbjct 64770 TGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCCG 64711
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||| || | || || || ||||| ||| || ||||| || || || |||||||
Sbjct 64710 ATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAAC 64651
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
||||| | || ||||| ||||| || |||| || ||||||| | | ||||| || |
Sbjct 64650 AAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAACA 64591
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
| || || || || || | ||| | || || | ||||||| ||||
Sbjct 64590 TTCAGAAGGAGTCCACCTTACATCTTGTGCTAAGGCTAAGAGGTGGTA 64543
>seq9
Length=431027
Score = 107 bits (118), Expect = 3e-18
Identities = 152/214 (71%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 146046 AAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACGATACTATTCAAAAT 146105
|| || || || || || || || ||| | || || ||| | || |||||| | |||
Sbjct 60870 AAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATTGACAAT 60929
Query 146106 GTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTT 146165
|| || || || ||| || ||||| || ||||| || ||||||||| | || |||
Sbjct 60930 GTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCTTT 60989
Query 146166 GCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCG 146225
|| ||||| ||||| || || |||||| || | || || || || |||||||||||
Sbjct 60990 GCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAAGAATCC 61049
Query 146226 ACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
||| | || ||||| || |||| ||||| ||||
Sbjct 61050 ACTTTGCACTTAGTCTTGAGATTGAGAGGTGGTA 61083
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 786166232939640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |