Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001670385.1_202016-06-
20] 17 sequences; 12,119,368 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq5 120 7e-22
seq9 118 3e-21
seq4 95.1 3e-14
>seq5
Length=574393
Score = 120 bits (132), Expect = 7e-22
Identities = 552/866 (64%), Gaps = 20/866 (2%)
Strand=Plus/Plus
Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363
||||||||||| |||||| | |||||| |||||||||| | |||| || | |
Sbjct 297536 TATTTTGGTTTTAAAACTTTGGAACGTTCTTATTTACTAAGAATCAACGGTCAAGTGGCC 297595
Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423
|||||||| ||||| | || | | || || | || || || || ||||| |
Sbjct 297596 GAACGTCCACAACATTTAATTATGAGAGTCGCACTAGGCATCCACGGTAGAGATATCGAG 297655
Query 110424 GCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTACC 110483
|||| | | ||| ||| | | | | ||| | || ||| || |||| ||
Sbjct 297656 GCTGCTTTAGAAACGTATAACTTGATGTCTCTAAAATATTTTACTCACGCCTCTCCAACG 297715
Query 110484 CTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTC-TAGGAATTAA 110542
| || || || || ||| | ||| || | ||||| |||||| | | || ||
Sbjct 297716 TTGTTCAATGCCGGTACTCCAAAACCTCAAATGTCCTCTTG-TTTCTTGGTTGCCATGAA 297774
Query 110543 CGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAAAA 110602
|| || ||||| || || ||||| || | | || ||| |||| | ||||| ||||
Sbjct 297775 GGAGGACTCTATCGAGGGGATTTACGACACCTTGAAGGAATGTGCTTTGATTTCCAAAAC 297834
Query 110603 CTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAAC 110662
|||| || |||||| | || | ||| | ||||| |||| || | | || ||
Sbjct 297835 TGCTGGTGGTATTGGTCTACATATCCATAACATTCGTTCAACTGGTTCTTACATTGCTGG 297894
Query 110663 AGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAA 110722
| || ||| |||| | || | |||| ||| | | || ||||| |||||||
Sbjct 297895 TACAAACGGTACTTCTAACGGTTTAATTCCTATGATTCGTGTTTTCAATAACACTGCCCG 297954
Query 110723 ATATGTGAATCAAGGTGGTAAGAGAAA---TGGCTCATTTGCTATCTATCTCGAACCTTG 110779
||||| | || |||||||| | || ||| | ||||| | || || ||||| ||
Sbjct 297955 TTATGTTGACCAGGGTGGTAATAAAAGACCTGGTGCGTTTGCCCTTTACCTGGAACCATG 298014
Query 110780 GCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAA- 110838
|||| | ||||||||||| || | || || | || || || || | |||| |||
Sbjct 298015 GCATGCTGATATATTTGATTTTATTGATATTAGGAAGAACCACGG---TAAAGAGGAAAT 298071
Query 110839 --GAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCA 110896
| ||| | ||||| || ||| | |||||| | ||| | |||||||| ||||| |
Sbjct 298072 TCGTGCAAGAGATTTGTTCCCTGCTCTATGGATTCCTGATCTTTTCATGAAGCGTGTCGA 298131
Query 110897 AGAAAATGGCATGTGGTCTCTTATGTGTCC-TCATCGTTCTCCTGGTCTATCTGATGTAT 110955
||||||||| | ||| | | | | ||| |||| |||||||| || ||| |
Sbjct 298132 AGAAAATGGGACCTGGACATTATTCTCTCCAACATC-AGCTCCTGGTTTAAGCGATTGTT 298190
Query 110956 ATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGG-CAAGTTTCG-CAA 111013
| || | |||||||| | || || || || |||||||| | | | | | |
Sbjct 298191 ACGGTGACGAGTTTGAGGCTCTATATACCCGCTACGAGAAAGAAGGTCGTGGTAAGACTA 298250
Query 111014 ACAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAAC 111073
||| ||| ||| || | |||| || | ||| | ||| ||||||||| ||
Sbjct 298251 TCAA-----AGCCCAAAAATTATGGTATTCCATTTTGGAAGCTCAAACTGAAACTGGTAC 298305
Query 111074 TCCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGGAAC 111133
|||| || | || || ||| | ||| | ||||||||||||| || |||||
Sbjct 298306 ACCTTTCGTTGTTTACAAGGATGCTTGTAACAGAAAATCTAATCAAAAAAACTTAGGTGT 298365
Query 111134 AATTAAGTCTAGTAATTTGTGCTGTG 111159
|| ||||| || || |||||||
Sbjct 298366 CATCAAGTCATCAAACTTATGCTGTG 298391
>seq9
Length=437878
Score = 118 bits (130), Expect = 3e-21
Identities = 394/607 (65%), Gaps = 7/607 (1%)
Strand=Plus/Minus
Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363
||||| || ||||| || || || ||| | || || || | | || || || |
Sbjct 238857 TATTTCGGATTCAAGACACTGGAGCGTTCGTACTTGCTAAGACTGAACGGTGAAGTGGCA 238798
Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423
||||||||||| || || | | ||||| ||| | ||||| ||||| ||||| ||
Sbjct 238797 GAACGTCCTCAGCATTTGGTAATGCGTGTGGCGCTAGGTATCCATGGTAGCGATATCGAA 238738
Query 110424 GCTGTTATTGAATGTTATGATGT-ATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTAC 110482
|||| | | |||| || | || || || | | | | ||| ||| | || ||
Sbjct 238737 TCTGTGCTGAAGACTTATAATTTGATGTCGTTAAGATACTTC-ACTCACGCTTCCCCAAC 238679
Query 110483 CCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTC-TAGGAATTA 110541
|||| ||||| || || ||| || |||| || |||||| | | || |
Sbjct 238678 TTTATTCAACGCTGGTACGCCACATCCTCAAATGTCTTCATG-TTTCTTAATTGCCATGA 238620
Query 110542 ACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAAA 110601
| ||||| ||||| ||||||||||||||| || | |||||| |||| | ||||| ||||
Sbjct 238619 AGGATGACTCTATCGAAGGTATTTATGATACTTTGAAAGAATGTGCTATGATTTCCAAAA 238560
Query 110602 ACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAA 110661
| || || ||||| |||| | | | || || || | ||| | |||||||
Sbjct 238559 CTGCAGGTGGTGTTGGTCTTCATATCAACAACATCCGTTCCACAGGTTCTTATATCGCTG 238500
Query 110662 CAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAA 110721
| || ||| |||||| || | |||| ||| | | || ||||| | |||||
Sbjct 238499 GTACCAACGGTACTTCAAACGGGTTGATTCCTATGATTCGTGTTTTCAATAATACTGCCC 238440
Query 110722 AATATGTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTATCTATCTCGAACCTT 110778
|||||| | || |||||| |||||| ||| | || || | | | || || |
Sbjct 238439 GTTATGTGGACCAGGGTGGTAACAAGAGACCTGGTGCTTTCGCCCTTTTCTTGGAGCCAT 238380
Query 110779 GGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAA 110838
||||| ||||||| || || || | || | | |||| || || ||||||
Sbjct 238379 GGCATGCAGATATCTTCGACTTTGTCGATATCAGAAAAACACATGGTAAGGAAGAAATTC 238320
Query 110839 GAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAG 110898
| ||| | ||||| || ||| | ||||| | ||| | |||||||||||||||||||
Sbjct 238319 GTGCAAGAGATTTGTTCCCTGCTCTATGGATCCCTGATCTTTTCATGAAACGTGTTCAAG 238260
Query 110899 AAAATGG 110905
| ||||
Sbjct 238259 AGGATGG 238253
>seq4
Length=1530499
Score = 95.1 bits (104), Expect = 3e-14
Identities = 127/175 (73%), Gaps = 4/175 (2%)
Strand=Plus/Minus
Query 304886 TTACAATATCATATTGCAACATTAATGGATAATGAAATTGCTGG--AATTATGCAGGCAT 304943
||||||| |||| |||| || | ||||||||||| |||||||| || | || ||
Sbjct 208592 TTACAATTTCATGTTGCCACTTATATGGATAATGATATTGCTGGTCAACCA--CAAGCTC 208535
Query 304944 CTCAAAGATCTGGCAGACCTTTAAAGGGTATTAGGCAACGCATTAAAGGTAAAGAGGGTC 305003
||||| || ||| | || | || |||| | || | || |||||||||||||
Sbjct 208534 TTCAAAAGTCCGGCCGTCCCGTTAAATCTATTCGTGCTCGTTTGAAGGGTAAAGAGGGTC 208475
Query 305004 GTATTCGAGGTAATCTAATGGGAAAACGTGTTGATTTTAGTGCAAGAAGTGTAAT 305058
|||| |||||||| ||||||| || ||||| |||||| ||||||| ||| ||
Sbjct 208474 GTATCAGAGGTAATTTAATGGGTAAGCGTGTGGATTTTTCGGCAAGAACTGTTAT 208420
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186812541497337
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |