Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001670385.1_202016-06-
20] 17 sequences; 12,119,368 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq11 181 2e-40
seq12 163 6e-35
seq9 159 7e-34
>seq11
Length=666000
Score = 181 bits (200), Expect = 2e-40
Identities = 160/200 (80%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| |||||| ||| ||| ||||||||||||||||||| || || | || || ||
Sbjct 617605 ACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACCGTCTTCC 617664
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| ||| || || ||||||||||| | |||||||||| || ||||| ||||||||||||
Sbjct 617665 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGG 617724
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
||||| | || || |||| || ||||| |||| ||| ||||| | |||||| ||||||
Sbjct 617725 ATCTTGGACTTGACATTATCAATGGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTA 617784
Query 283071 CCCGTCAAAGTCTTAACGAA 283090
|| |||||||||||||||||
Sbjct 617785 CCAGTCAAAGTCTTAACGAA 617804
>seq12
Length=1077483
Score = 163 bits (180), Expect = 6e-35
Identities = 153/195 (78%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||||||||||||||| | | || | ||||| || | ||| || || |||||
Sbjct 498801 TTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAA 498742
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
|||||| | |||||||||| |||||||| ||||||||||||||||| | || || |
Sbjct 498741 GATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGACTTGACATT 498682
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| |||||||| |||| ||| ||||| || || || |||||||| || |||||||| ||
Sbjct 498681 GTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGAC 498622
Query 283088 GAATATCTGCATTTT 283102
||| || ||||| ||
Sbjct 498621 GAAAATTTGCATCTT 498607
Score = 156 bits (172), Expect = 9e-33
Identities = 152/193 (79%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 282908 TTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAA 282966
||| ||||||||||||||||||| |||| || | || || ||||| || || |||||||
Sbjct 64451 TTCCTTTTGGATGTTGTAGTCAGACAAG-GTTCTACCGTCTTCTAGCTGCTTACCGGCAA 64509
Query 282967 AGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGG 283026
||||||| | ||||| || || ||||| |||||||| ||||| || | || |||
Sbjct 64510 AGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGATTTTCGACTTAACGT 64569
Query 283027 TATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAA 283086
||||||| ||||| || | ||| || || | |||||| || ||||| |||||||||||||
Sbjct 64570 TATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAA 64629
Query 283087 CGAATATCTGCAT 283099
| || ||||||||
Sbjct 64630 CAAAGATCTGCAT 64642
Score = 152 bits (168), Expect = 1e-31
Identities = 170/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| | || | || || |||||||| ||| || || || |||||||| ||||
Sbjct 64643 ACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGA 64702
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||||| | || || ||||| || || |||||||||||||| | ||||| || ||
Sbjct 64703 CAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAANCTNTGTTGATCTGGAGG 64762
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||||| ||||||||||| || || | || ||| | ||||| || || |||| ||| ||
Sbjct 64763 GATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAAC 64822
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||| | || || || ||||| ||||||||||| ||||| ||||||||
Sbjct 64823 TTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 64870
Score = 143 bits (158), Expect = 6e-29
Identities = 157/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| ||| ||||| ||||| || ||||| || |||| ||||| | || || ||
Sbjct 64206 ACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCTTCC 64265
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
||||| || |||||||| ||||| | |||||| || |||||||| |||||||||||
Sbjct 64266 AGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTCTTGA 64325
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
|| || | || ||| | ||||||||||| |||| ||| || || || || || ||||||
Sbjct 64326 ATTTTCGACTTAACGTTGTCGATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTA 64385
Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| |||| ||||| || || || |||||
Sbjct 64386 CCTGTCAGTGTCTTGACAAAAATTTGCAT 64414
Score = 141 bits (156), Expect = 2e-28
Identities = 146/191 (76%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
|| ||||| || |||||||| | ||||| | ||||| |||||||| || ||||||||
Sbjct 63768 TCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAA 63827
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028
||||| | ||| ||||| |||||||| ||||||||||| || || | || ||| |
Sbjct 63828 ATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTG 63887
Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088
|| |||||||| |||| ||| || || || || || |||||||| |||| ||||| ||
Sbjct 63888 TCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACA 63947
Query 283089 AATATCTGCAT 283099
|| || |||||
Sbjct 63948 AAAATTTGCAT 63958
Score = 129 bits (142), Expect = 1e-24
Identities = 148/194 (76%), Gaps = 4/194 (2%)
Strand=Plus/Plus
Query 282908 TTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAA 282966
||| ||||||||||||||||||| |||| || | ||||| |||||||| || || ||||
Sbjct 63995 TTCCTTTTGGATGTTGTAGTCAGACAAG-GTTCTACCATCTTCTAGTTGCTTACCAGCAA 64053
Query 282967 AGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTT-ACG 283025
| ||||| | ||||| || || ||||| || || ||||| || ||| ||||| |||
Sbjct 64054 AAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATCTTGAAT-TTTACTTTTGACG 64112
Query 283026 GTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTA 283085
| || |||||||| |||| ||| || || || || || ||||| || || | ||| ||
Sbjct 64113 TTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTG 64172
Query 283086 ACGAATATCTGCAT 283099
||||| || |||||
Sbjct 64173 ACGAAAATTTGCAT 64186
>seq9
Length=437878
Score = 159 bits (176), Expect = 7e-34
Identities = 154/195 (79%), Gaps = 2/195 (1%)
Strand=Plus/Minus
Query 282897 TGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTG 282955
|| || ||| ||||||||| ||||||||||||| |||| || | || || || | |||
Sbjct 67925 TGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAG-GTTCTACCGTCTTCCAATTG 67867
Query 282956 TTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTT 283015
|| || ||||||||||| | |||||||||| || ||||| ||||||||||| |||||
Sbjct 67866 CTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGAATCTT 67807
Query 283016 TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGT 283075
|| || || | || |||||||| |||| ||| ||||| | |||||| |||||||| ||
Sbjct 67806 TGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCAGT 67747
Query 283076 CAAAGTCTTAACGAA 283090
||||||||| || ||
Sbjct 67746 CAAAGTCTTGACAAA 67732
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046738972007118
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |