Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001670415.1_202016-06- 20] 17 sequences; 12,102,038 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq2 132 6e-26 seq15 114 2e-20 >seq2 Length=810784 Score = 132 bits (146), Expect = 6e-26 Identities = 388/589 (66%), Gaps = 28/589 (5%) Strand=Plus/Minus Query 164398 AATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCAGACGA 164457 || |||||||| |||| || ||||| | ||| ||| ||| || ||||||||| || Sbjct 398982 AAGTTTGAAGATTTGGGTGTCGGTGGTTTGGATAAAGAGTTTACTAAAATTTTCAGAAGA 398923 Query 164458 GCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTGTAAACATATA 164517 || ||||| | || ||||| | | ||| ||||| | || | ||| | Sbjct 398922 GCGTTTGCAAGTCGAATCTTTCCTCCTTCAGTTATAGAAAAACTGGGTATTTCTCATGTT 398863 Query 164518 AAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGCATT 164577 ||||| | |||| | || ||||| ||| ||||| || ||||| || || ||| Sbjct 398862 AAAGGTTTGCTATTGTACGGTCCTCCAGGTACTGGTAAGACCTTAATTGCAAGAAAGATT 398803 Query 164578 GCT-CAAGCTTTTAAATCGC----GACCCGTTAAAATTGTTAATGGTCCTGAATTATTGA 164632 | | ||| | | ||| || || || ||||| || |||||||| ||| | |||| Sbjct 398802 GGTACAA--TGCTGAAT-GCTAAAGAGCCC--AAAATCGTCAATGGTCCAGAAATTTTGA 398748 Query 164633 ACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGAAG 164692 || || || ||| ||||||| || || | || || ||| |||| || |||| || Sbjct 398747 GTAAGTACGTTGGTTCTTCAGAAGAAAACATTCGTAATTTATTTAAGGATGCAGAAGCAG 398688 Query 164693 AACAAAAGAAAGC--AGGTTTAGCTAG-TAAATTACATGTTATTGTTTTTGATGAGATAG 164749 || | | | || ||| | || | | |||||| ||||| |||| |||||| | | Sbjct 398687 AATATAGG---GCCAAGGGTGAGGAATCTTCCTTACATATTATTATTTTCGATGAGCTGG 398631 Query 164750 ATGCTCTTTGCAAAAAACGTGGT------GATAATATTATTCATGATG----CAGTG--G 164797 || || ||| ||| | | ||| | | || || | || | || || | Sbjct 398630 ATTCTGTTTTCAAGCAGAGAGGTTCAAGAGGTGATGGTACTGGTGTAGGGGACAATGTAG 398571 Query 164798 TTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATTGTAG 164857 ||||||| ||| | ||||||| |||||||| || || ||||||||||| || | | Sbjct 398570 TTAATCAATTGTTAGCTAAAATGGATGGTGTTGATCAATTGAATAATATTTTGGTTATTG 398511 Query 164858 GTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTAGAAT 164917 |||||||||| || |||||||| || | |||| | || || || ||| |||| ||| Sbjct 398510 GTATGACCAATCGTAAAGATTTAATAGACGGTGCTCTTTTGCGTCCAGGTAGATTTGAAG 398451 Query 164918 TGAAAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAATTTT 164966 | || | ||||| |||||||| || ||||| | || |||||||| Sbjct 398450 TCCAAGTTGAAATTCATTTACCCGATGAAAAAGGAAGACTCCAAATTTT 398402 >seq15 Length=1061832 Score = 114 bits (126), Expect = 2e-20 Identities = 123/163 (75%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 19341 TAAGATCTTCTAAAATACCTGAAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAG 19400 ||||| || | || || ||| |||| ||||| || ||||||||| | | |||||| | Sbjct 584678 TAAGAACTACAAAGATTCCTCAAATTGGTGACAAATTTGCTTCTCGTCACGGTCAAAAGG 584619 Query 19401 GCACATGTGGTATGATTTATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGC 19460 | || |||||| | |||||| |||||||||||| ||||| ||| ||||| || | Sbjct 584618 GTACTATTGGTATCACATATCGTAGAGAAGATATGCCATTTACCGCAGAAGGTATTGTTC 584559 Query 19461 CGGATCTTATTATTAACCCACATGCTTTTCCAAGTCGAATGAC 19503 | ||| | ||||||||||| |||||| ||||| ||| ||||| Sbjct 584558 CAGATTTGATTATTAACCCTCATGCTATTCCATCTCGTATGAC 584516 Score = 107 bits (118), Expect = 2e-18 Identities = 405/632 (64%), Gaps = 49/632 (8%) Strand=Plus/Plus Query 6699 TGGATGAGGATTATAATCTAACAATTCAAAATCTTCAAATTTAAAATCACATAAAT-TAT 6757 ||||||||||||||||||| | |||||| ||| || || |||||| | ||| | | Sbjct 437611 TGGATGAGGATTATAATCTTCAATTTCAAAGTCTGTCAACTTGAAATCA--TCAATGTCT 437668 Query 6758 CAGACtttttttttAATATTACAACAGGTGAA-GGTTTT--ATTGATCGAGTTAATTGTT 6814 || | ||||||| || | ||| ||| || ||| | ||| | ||||| Sbjct 437669 TTAACGTCCCTTTTAATCTTTAGTTTCGGGAATGGTCTTGGATTTCTGGAGAT--TTGTT 437726 Query 6815 CTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAATAAATT 6874 |||| | || | || || ||| ||||| ||| ||||| || | |||||||| || | Sbjct 437727 CTTTCAAGGCATCAATGTGGTCTTTATAAACATGTGCATCCCCCAAAGTATGAATGAACT 437786 Query 6875 CACCTGGTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCATAAGAAGCTA 6934 ||||||| | ||| || ||| ||| |||||| | || || || ||||| || || | Sbjct 437787 CACCTGGCTCCATGTCGACAACTTTAGCAATCATTCTAGTCAACAAAGCATATGATGCAA 437846 Query 6935 CATTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTGATAACATTGACAAG-ATAAA 6993 ||||| ||||| || || |||||||| || | ||| || || ||| || || Sbjct 437847 TGTTAAATGGTACTCCCAACCCCATATCACAAGAACGTTGGTACAAT----AAGCATGAA 437902 Query 6994 A---------TATTG------------TCTATAG---------CATAAAATTGACACAAT 7023 | || | ||| | | |||| || || | || Sbjct 437903 AGGCGGGGCTTACCGGATCCTTCTCCTTCTTTGGGGAAACTGACATAGAACTGTGAAAAA 437962 Query 7024 ACATGACATGGAGGTAAAACAGCCTGATCTATATCAGATGGATTCCAAGCAGTCATTAAA 7083 | ||| ||||| || ||| | | || | ||||| ||| ||||| ||| |||| | Sbjct 437963 ATATGGCATGGTGGCAAAGCCATTTTGTCAAAATCAGCTGGGTTCCAGGCACTCATAATG 438022 Query 7084 ATACGTCTATCATTTGGATTTGTTTTTAATTTTGTTATAATTATTTGTAATTGATCTATA 7143 || | |||||| | |||||||| |||| ||| |||| || |||||||| ||| Sbjct 438023 ATTCTTCTATCGTAGGGATTTGTCTTTAGTTTATGAATAACCTGTTTCAATTGATCAATA 438082 Query 7144 CCCTGACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCAAAATGTCTCCATTGA 7203 || || || ||| | || || | | || ||||| |||||||| ||||||||| Sbjct 438083 CCTTGTCCAGTATAGTCGTCATCGCACGTCTTGTATTTAGCACCAAAATGCCTCCATTGA 438142 Query 7204 AACCCATAAATAGGACCTAAATCACCTTCTTCACGATGATTAAATCCTAATCGATTTAAA 7263 || ||||||| || || | ||| ||| ||| | || || || || | | || |||| Sbjct 438143 AATCCATAAACGGGCCCCAGATCTCCTACTTTCCTATCTTTGAACCCCATCCTATCTAAA 438202 Query 7264 TTAGATT---TTGATCCATAAGCATCCCAAAT 7292 | ||| ||||||| | | |||||||| Sbjct 438203 T---ATTCACGAGATCCATTACCGTCCCAAAT 438231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595871873377200