Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001670415.1_202016-06- 20] 17 sequences; 12,102,038 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq12 95.1 9e-15 >seq12 Length=1077541 Score = 95.1 bits (104), Expect = 9e-15 Identities = 153/219 (70%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 21830 CAAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGC 21889 ||| |||||||| || | || || ||||| || || || |||||| ||||| ||| | Sbjct 498653 CAAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATC 498712 Query 21890 CGCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGT---ACCTGT 21946 | || || | | | || | ||| || || || || || ||| | ||||| Sbjct 498713 TTCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTG- 498771 Query 21947 AAACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGA 22006 ||||||| ||| | ||||||||||| || ||| | |||||| | |||| || |||| Sbjct 498772 --ACCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGA 498829 Query 22007 TTACAATATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 ||||| || || |||||||||||||| || |||| || Sbjct 498830 CTACAACATCCAAAAGGAATCTACTCTACACTTGGTCTT 498868 Score = 91.5 bits (100), Expect = 1e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 21918 AAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAACAGAGACTTATCTTTGCTGGCAAA 21977 |||||| |||||||| ||| | ||| | ||||||||| | || |||||||| || Sbjct 64149 AAAATTCAAGATAAAGAAGGTATCCCTCCGGATCAACAGAGATTGATTTTTGCTGGTAAG 64090 Query 21978 CAACTAGAAGATTTAAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCAT 22037 |||||||||||| | ||| || | || ||||| || || ||||||||||||||||| Sbjct 64089 CAACTAGAAGATGGTAGAACCTTGTCTGACTACAACATCCAAAAGGAATCTACTCTTCAC 64030 Query 22038 ATGGTATT 22045 |||| || Sbjct 64029 TTGGTGTT 64022 Score = 86.0 bits (94), Expect = 4e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || ||| |||| || || || || |||||||| || | || ||| || | Sbjct 64689 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 64630 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || ||| | | | ||||| ||||| || || || ||| | ||| | | ||| Sbjct 64629 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAA 64570 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||||| | |||||||| || || || |||||||| | ||| || | || ||||| Sbjct 64569 CAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAAC 64510 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 || || ||||||||||||||||| |||| || Sbjct 64509 ATCCAAAAGGAATCTACTCTTCACTTGGTGTT 64478 Score = 82.4 bits (90), Expect = 5e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| | || ||| | || || || || || ||| | || ||| | | Sbjct 64005 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 63946 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | | ||||| |||||| || || || ||| | ||| | |||| Sbjct 63945 GACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 63886 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || ||| | || ||||| || || |||||||||||| | ||| || | || |||||| Sbjct 63885 CAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAAT 63826 Query 22014 ATTCAGAAGGAATCTACTCTTCA 22036 ||||| ||||| || |||||||| Sbjct 63825 ATTCAAAAGGAGTCCACTCTTCA 63803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358124725801018