Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001670415.1_202016-06-
20] 17 sequences; 12,102,038 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq12 199 9e-46
seq9 158 3e-33
seq11 150 4e-31
>seq12
Length=1077541
Score = 199 bits (220), Expect = 9e-46
Identities = 173/215 (80%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 194926 CTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCA 194985
||||| |||||||||||||||||||| |||||||||||||| || | || ||||| |||
Sbjct 63791 CTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCA 63850
Query 194986 TCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTG 195045
||||| || |||||||| || || || | || ||| |||||||||||||| ||||| |||
Sbjct 63851 TCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTG 63910
Query 195046 TCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACC 195105
||||||||||| ||| ||||| ||||| ||||| ||| ||| || || ||||| |
Sbjct 63911 TCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATA 63970
Query 195106 GTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||||| ||||||| || || || || | ||||||
Sbjct 63971 GTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 64005
Score = 174 bits (192), Expect = 3e-38
Identities = 174/223 (78%), Gaps = 2/223 (1%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977
||| |||||||| || | ||||||||| || || ||||| || ||||| || | |||| |
Sbjct 64012 TCTCAGTCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAG-G 64070
Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037
|||| |||||||| || |||||||| || || || | || ||||| || ||||| || |
Sbjct 64071 TTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATAC 64130
Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097
||||||| ||||||||||| |||||||| ||||| ||||| ||| ||| || || |
Sbjct 64131 CTTCTTTATCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTA 64190
Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|||| | ||||| ||||| | |||||| ||||| | ||||||
Sbjct 64191 GGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 64233
Score = 158 bits (174), Expect = 3e-33
Identities = 168/222 (76%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | |||||| || | || | || |||||||| ||||| || ||||| | || ||
Sbjct 64240 TCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGT 64299
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| || ||||| || |||||||| || || || | || |||||| ||||||||||| ||
Sbjct 64300 TCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGAATACC 64359
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| |||||||||||||| ||| ||||| || || ||||| ||| ||| || || ||
Sbjct 64360 TTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATAGTGTCAGAAGATTCAACCTCTAG 64419
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||| | ||||| ||||||| || || || || | ||||||
Sbjct 64420 GGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 64461
Score = 154 bits (170), Expect = 3e-32
Identities = 167/222 (75%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| || || | ||||| || | |||||||| || ||||| |||||||| | || ||
Sbjct 64696 TCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGT 64755
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| || ||||| ||||||||||| || ||||| | | ||||| |||||||| || ||
Sbjct 64756 TCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAANCTNTGTTGATCTGGAGGGATACC 64815
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| |||||||||||||| ||| ||||| || ||||| || ||| ||| ||||| |
Sbjct 64816 TTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAA 64875
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| | || || || |||||||| || ||||| | |||||
Sbjct 64876 TGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 64917
Score = 134 bits (148), Expect = 3e-26
Identities = 165/223 (74%), Gaps = 2/223 (1%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977
||| | |||||| || | ||||||||| || || ||||| || ||||| || | |||| |
Sbjct 64468 TCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAG-G 64526
Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037
|||| || ||||| ||||||||||| || ||||| | | ||||| |||||||| || |
Sbjct 64527 TTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATAC 64586
Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097
|||| ||||| || ||||| ||| ||||| || || ||||| || ||| || || |
Sbjct 64587 CTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTA 64646
Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| | || || || |||||||| || || || | |||||
Sbjct 64647 AAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 64689
>seq9
Length=437568
Score = 158 bits (174), Expect = 3e-33
Identities = 165/214 (77%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977
||| | |||||| || | ||| | |||||| ||||||||||| ||||| || | |||| |
Sbjct 67979 TCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAG-G 67921
Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037
|||| || ||||| | |||||||| || ||||| | || ||||||||| || || || |
Sbjct 67920 TTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATAC 67861
Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097
|||| ||||||||||| ||| |||||| || ||||| ||||| ||| ||| ||||| |
Sbjct 67860 CTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCA 67801
Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131
|| | ||||| || |||||||| || || ||
Sbjct 67800 AAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 67767
>seq11
Length=665290
Score = 150 bits (166), Expect = 4e-31
Identities = 161/213 (76%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | |||||| || | || | |||||| || ||||| || ||||| || | |||||
Sbjct 617390 TCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGT 617449
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| || ||||| | |||||||| || ||||| | || ||||||||| || || || ||
Sbjct 617450 TCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACC 617509
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| |||||||| || || |||||| || ||||||||||| ||| ||| ||||| |
Sbjct 617510 TTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAA 617569
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131
|| | ||||| || |||||||| || |||||
Sbjct 617570 AGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 617602
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109481358341039
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |