Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001670965.1_202016-06-
20] 17 sequences; 12,114,202 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq10 230 3e-55
seq9 217 2e-51
seq5 170 2e-37
>seq10
Length=744283
Score = 230 bits (254), Expect = 3e-55
Identities = 608/916 (66%), Gaps = 17/916 (2%)
Strand=Plus/Minus
Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729
||||| || || | |||||| ||||| ||||| ||||| || || | || || || |
Sbjct 392170 TTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCTTACCGGCCAAGGAGATGTTT 392111
Query 18730 TCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGT 18789
||||| ||||| || || |||| || || || ||| ||| || || | | |
Sbjct 392110 TCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCTTGTTACCGAAAGCGACCAAC 392051
Query 18790 AGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAAT 18849
||||| || || || || | || ||| |||||| | ||| ||||| |||| ||
Sbjct 392050 AGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGTCAGCGTTCATACCTAGCAAA 391991
Query 18850 TTAACAGGTAGTGCATCTGTAAGAAAT-TCTT-GTTCTATATTTACTGCCTCTGATATAA 18907
||| |||| || || ||||| | |||| |||| || | || ||||| | | ||
Sbjct 391990 GCAACTGGTAAGGCGTCC--AAGAAGTATCTTTGTTCAATTTCCACAGCCTCGGTGACAA 391933
Query 18908 TAGATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCAA 18967
| | |||| | || | || || | ||| |||| ||| |||||||
Sbjct 391932 TTTTTTCAACGATGGCTGGGTCTGGTTTGTTCTTCAAATGGGCGAACAACAAGCATGCAA 391873
Query 18968 AATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCA 19027
| || || | || |||||||||| |||||||| || ||||| |||||||| ||||
Sbjct 391872 AGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAAAAGGTTAAACCGGGCA 391813
Query 19028 TCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTT 19087
||| ||||| ||||| |||||||| || || ||||| || || || || || | |||||
Sbjct 391812 TCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCGGAGAAAAAGACACCTT 391753
Query 19088 CTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTA-GCATCATTATTATGAATCCAT 19146
| | | ||||| |||||||||||||| ||| ||| | || ||| | |||||||||
Sbjct 391752 CAATGGAGGCAAAGGCAACTAGTCTTTCACCA-AACAAGGCGTCAGCGTCTTGAATCCAT 391694
Query 19147 TTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGA 19206
| | ||||| || ||||||| | ||| || || | || | ||| || | |
Sbjct 391693 CTTAAAGCCCATTCGGCCTTCTCACCGATTTCTGGGATGGTGTGAATGGCATTGAACA-A 391635
Query 19207 TACATACGCTCATCTGTA---TCTTTAACATATGCATCTATCAATAAACTGTACATTTCT 19263
| || | || ||| || || || | || | ||| ||||| || ||| ||||
Sbjct 391634 GA-ATTCACT-TTCTTTAGGGTCCTTGATGTAAGTATCGATCAACAAGGAGTAAGTTTCA 391577
Query 19264 GAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGT 19323
|| ||||||||||| || || || || ||||| |||| |||| |||| || ||
Sbjct 391576 GAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTCTTTGCCTCTGGAATTTGG 391517
Query 19324 ACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAA 19383
||||| | | || |||| ||||| ||||||||||| || || ||| ||| || |||
Sbjct 391516 ACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATACCGTCAGAAGCGGCGAAA 391457
Query 19384 AATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAAT----GTATTCCAATC 19439
|| || | || ||| ||| | | || | | ||| || | ||||| ||
Sbjct 391456 AAGGCAAGAACTCTGGAAATGAAAAATCTCTCGT-TCTCGTTCATTCTGTTGTTCCAGTC 391398
Query 19440 ATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTT 19499
|| ||||| ||||| ||||| | ||||||| | ||||| |||||||| || || ||
Sbjct 391397 ATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAAGAAGCTTCGGCACGCTT 391338
Query 19500 ATACATGTTCCATATATCACGATATTGTATAGGAAATATAACAAATCTATTTTTATTTTC 19559
|| | ||| || ||| | || | ||||| || | |||| ||| | || | |||
Sbjct 391337 GTAGGCTTGCCAGATTTCATGGTACTTGATAGGGAAAAGAACAGTTCTCTCCTTGTCTTC 391278
Query 19560 TTTAAGAATAGGTTCC 19575
|| | | |||||||
Sbjct 391277 ATTCAACAAAGGTTCC 391262
>seq9
Length=434616
Score = 217 bits (240), Expect = 2e-51
Identities = 564/860 (66%), Gaps = 3/860 (0%)
Strand=Plus/Plus
Query 47877 AGTGCTATAGATGCTAGATTACATACAGCTACCTCATTTGGATTAGTATATTGTATTATT 47936
|| || ||||| |||| |||||| || || |||| || | ||||| | |||
Sbjct 237946 AGGGCAATAGAAGCTAAATTACAAACTGCAGTTTCATCCGGGGAGGAATATTCGACGATT 238005
Query 47937 TCAGCACATAGATTACCACATTTGATAGTACCCAAATTTTGATGATTATTNNNNTTGTTA 47996
||| ||||| ||| ||||||||||||| || || || || || | |||||
Sbjct 238006 TCACAACATAANTTAGATGATTTGATAGTACCTAAGTTCTGTTGGTTTGTCTTCCTGTTA 238065
Query 47997 CATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGAT 48056
||||||||||| |||| ||| |||||||| || |||||| |||| | || | || |
Sbjct 238066 CATGCGTCCTTATAAACCATGAAAGGTGTACCTGTTTCTGTCTGTGCTTGCAAAATGGCA 238125
Query 48057 TTCCAAACAGTCCTAGCCTTTATAACAGCTCTAGCTTTATTATCATGTTCGTATTTAGTA 48116
| ||| | | | | | ||||| | | | || | | || |||||| ||||
Sbjct 238126 TACCACA-ACTTTTGGGCTTTA--ATTGTTTTACCACGACCTTCTCTTTCGTAACGAGTA 238182
Query 48117 TATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACAC 48176
|||| | ||||||||||| || |||||| |||||| || || || | || |
Sbjct 238183 TATAGTTCTTCAAATTCATCACCCCACACATCATCTAAACCTGGGGCAGCACTGGGNGAA 238242
Query 48177 ATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGA 48236
| || | |||| | |||| | || || | |||| || | ||| || ||||| |||
Sbjct 238243 AANAAAGTCCAAGGCCCATCCTCTTGAACACGTTTCATGAAAAGATCAGGGATCCATAGA 238302
Query 48237 GCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGA 48296
|| || ||||| || | | | |||||| || ||| | || | | || | |
Sbjct 238303 GCAGGGAACAAATCTCTTGCACGAATTTCTTCCTTACCATGTGTTTTTCTGATATCGACA 238362
Query 48297 AAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTA 48356
||||| | ||||| ||||||||||| || || | | || | |||| |||| ||
Sbjct 238363 AAGTCGAAGATATCTGCATGCCATGGCTCCAAGAAAAGGGCGAAAGCACCAGGTCTCTTG 238422
Query 48357 TTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATA 48416
||||| || || || | ||| | ||||||||| || |||| | | ||| || | |
Sbjct 238423 TTACCACCCTGGTCCACATAACGGGCAGTATTATTGAAAACACGAATCATAGGAATCAAC 238482
Query 48417 CCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATT 48476
|| ||||| |||| ||||| || | |||||| || | | | || || | ||
Sbjct 238483 CCGTTTGAAGTACCGTTGGTACCAGCGATATAAGAACCTGTGGAACGGATGTTGTTGATA 238542
Query 48477 GAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAA 48536
|| ||| | ||||||||| |||| || || | |||||| ||| | |||||||||
Sbjct 238543 TGAAGACCAACACCACCTGCAGTTTTGGAAATCATAGCACATTCTTTCAAAGTATCATAA 238602
Query 48537 ATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGA 48596
|| ||||| ||| ||||| |||| | || ||||| ||||||||| |||||
Sbjct 238603 ATACCTTCGATAGAGTCATCCTTCATGGCAATTAAGAAACATGAAGACATTTGAGGATGT 238662
Query 48597 CAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAAT 48656
|| || | || ||||| ||||| || || ||| | || || | || | |||
Sbjct 238663 GGCGTACCAGCGTTGAATAAAGTTGGGGAAGCGTGAGTGAAGTATCTTAACGACATCAAA 238722
Query 48657 TTATATGTTTCAATAACAGAATCTATATCCCATTGATGTATACCTATAGATACACGCATT 48716
||||| || | | ||||| || ||||| | ||| ||||||| | |||||||||
Sbjct 238723 TTATAAGTCTTCAGCACAGATTCGATATCGCTACCATGGATACCTAGCGCCACACGCATT 238782
Query 48717 AACATATATTGAGGTCTTTC 48736
| || || ||||| | |||
Sbjct 238783 ACCAAATGCTGAGGACGTTC 238802
>seq5
Length=575019
Score = 170 bits (188), Expect = 2e-37
Identities = 808/1270 (64%), Gaps = 43/1270 (3%)
Strand=Plus/Minus
Query 47958 TTGATAGTACCCAAATTTTGATGATTATTNNNNTTGTTACATGCGTCCTTGTAAAGCATA 48017
||||| ||| || |||| |||||| ||||||| || |||||||||| |
Sbjct 298737 TTGATGACACCTAAGTTTTTTTGATTAGATTTTCTGTTACAAGCATCCTTGTAAACAACG 298678
Query 48018 AAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCAAACAGTCCTAGCCTTT 48077
|||||||| |||||||| | |||| ||| | || || | ||| | | | | | ||||
Sbjct 298677 AAAGGTGTACCAGTTTCAGTTTGAGCTTCCAAAATGGAATACCATA-ATTTTTGGGCTTT 298619
Query 48078 ATAACAGCTCTAGCTTTATTATCATGTTCGTATTTAGTATATAACTTCTCAAATTCATCC 48137
| || || | | || | ||||| ||||||| |||||| || ||
Sbjct 298618 G--ATAGTCTTACCACGACCTTCTTTCTCGTAGCGGGTATATAGANCCTCAAACTCGTCA 298561
Query 48138 CCATACACATTATCT-AACCCAGGACATTCATTAGGACACATCAATGACCAATCCTCATC 48196
|| || ||| | || || |||||| | | ||| | | |||| ||| | |||
Sbjct 298560 CCGTA-ACAATCGCTTAAACCAGGAGCTGATGTTGGAGAGAATAATGTCCAGGTCCCATT 298502
Query 48197 ATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGT 48256
| || || | |||| || | ||| || ||||| ||||| || ||||| || |
Sbjct 298501 TTCTTCGACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGC 298442
Query 48257 TCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATG 48316
| | ||| || || || ||| | ||| |||| ||| || | ||||||||||||
Sbjct 298441 ACGAATTTCCTCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAATATATCAGCATG 298382
Query 48317 CCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATA 48376
||||||||| | || | || | |||| |||| ||||||||| || || || | |||
Sbjct 298381 CCATGGTTCCAGGTAAAGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCAACATA 298322
Query 48377 TCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGT 48436
| |||||| || || |||| | | ||| || | | ||| || || |||| || ||
Sbjct 298321 ACGGGCAGTGTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCGTTTGT 298262
Query 48437 TCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGAAATACCTATACCACCTGC 48496
|| | ||| ||| ||| | | | || ||| || | ||| |||||||| ||
Sbjct 298261 ACCAGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCACCAGC 298202
Query 48497 CATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATC 48556
|||| || || | |||||| || | ||| || ||||| || || ||| || ||
Sbjct 298201 AGTTTTGGAAATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTC 298142
Query 48557 TATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAA 48616
|||| | | |||||| |||||||| || | ||| || | ||| || ||
Sbjct 298141 CTTCATGGCAACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATTGAACAA 298082
Query 48617 TGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGA 48676
|||||||| || ||| |||| |||| || | ||| ||||| ||||| | | |||
Sbjct 298081 CGTTGGAGAGGCGTGAGTAAAATATTTTAGAGACATCAAGTTATACGTTTCTAAAGCAGC 298022
Query 48677 ATCTATATCCCATTGATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTC 48736
|| ||||| | || || |||| | || | ||| | | || ||| || | |||
Sbjct 298021 CTCGATATCTCTACCGTGGATGCCTAGTGCGACTCTCATAATTAAATGTTGTGGACGTTC 297962
Query 48737 AACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATA 48796
| | || || ||| | | | ||| || |||||| |||||||||||||||||
Sbjct 297961 GGCCACTTGACCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCAAAATA 297902
Query 48797 GTTGTA-TGAAAAGTCGTTATCATTAATAATTGATGAATTTATTCTTTCCTTATGTT-TA 48854
|||| |||||| || | |||| | ||||| || || | | | ||||| | || |
Sbjct 297901 ACTGTACTGAAAA-TCTCTGTCATAGACAATTGCGGAGTTCAATTTATCCTTGTTTTCCA 297843
Query 48855 T----ATACT----ACATCCATTACATTTTTTGATA-------TA-----------ATTG 48888
| ||| | |||| ||| | | | || | || ||||
Sbjct 297842 TGACAATATTGTAGACAT-CATCAGAGATCATGGGAGCGGGCTTACCAGTAGCAGCATTG 297784
Query 48889 A-TTCCTTGTAAAGATCTTCTACAACATCACTAAATAttttttttGTTTCTTTATGAAGA 48947
| | | ||||||||||| ||||| | | |||| |||| | |||| |||||| | |
Sbjct 297783 ACGTATCTATAAAGATCTTCGACAACCTTAGAAAATTGTTTTGTGGTTTGTTTATGTAAA 297724
Query 48948 TTAGATATAGATATTCTAGCAGCTAATATAGCATAATCTGGATGAATTGTTGTACATGTA 49007
||||| || | ||||| || |||| | || ||||||||||||| || || ||| ||
Sbjct 297723 TTAGAAATGGCAATTCTGGCCGCTAGGGTGGCGTAATCTGGATGAACAGTAGT-CATATA 297665
Query 49008 CTAG-ATATTTCTGCTGCTAATATATCTAATTCTTTAGTAGTTACACCTGTATATATTCC 49066
| || |||| || ||||| | |||| ||| | || || |||||| ||| | ||
Sbjct 297664 AGCGCATGTTTCAGCGGCTAAGTTGTCTAGTTCGATTGTTGTGACACCTTCATAGACACC 297605
Query 49067 TTGAATAACTTTCATT--GCTATATTTACTGGATCTATATGATCCATATCCAGTCCATAA 49124
||| | | | || | | || || | || ||||| | ||| | |||||
Sbjct 297604 AGAAATGA--TACGTTGGGTGACCTTAACGGCGTCGATATGTTTTGGATCTAAACCATAG 297547
Query 49125 CATAAtttttttATTCTAGATGTAATTTTATCAAACATTATATTCTCTTTACGACCGTCA 49184
||||| | ||| | || ||||| ||||| || | | ||||||||||||||
Sbjct 297546 CATAAGCGTGATATACGAGCGGTAATCTTATCGAATTGGACAGGTTCTTTACGACCGTCT 297487
Query 49185 CGTTTTATAA 49194
| ||||||||
Sbjct 297486 C-TTTTATAA 297478
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562108680551880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |