Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001670995.1_202016-06- 20] 17 sequences; 12,124,525 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq10 120 3e-22 >seq10 Length=744325 Score = 120 bits (132), Expect = 3e-22 Identities = 530/831 (64%), Gaps = 23/831 (3%) Strand=Plus/Minus Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003 ||||| || ||| |||||||||||| ||||| || || || || | || || || ||| Sbjct 392231 TTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCTTACCGGCCAAGGAGATGTTT 392172 Query 16004 TCCATAAAATCAAAAGGATTTTTTGAAC-AATAGTATTTATCGCATCCCAATTCCAACAA 16062 ||||| ||||| |||| |||| || | |||||||| | | || || | | ||| Sbjct 392171 TCCATGAAATC-GAAGGGGTTTTCGACCTTGTAGTATTTCTTGTTACCGAAAGCNACCAA 392113 Query 16063 TAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTAA 16122 | ||| || || || || || | || || |||||||| ||| |||||| |||| || Sbjct 392112 CAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGTCAGCGTTCATACCTAGCAA 392053 Query 16123 TTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTAT 16182 ||| || | || || || | ||| ||| || | || || || ||| || Sbjct 392052 AGCAACTGGTAAGGCGTCCAAGAAGTATCTTTGTTCAATTTCCACAGCCTCGGTGACNAT 391993 Query 16183 ATCTCTTACTACACTATTTAACGGAGGGTTTAAT----AAGTGTTTAAACATTATACAAG 16238 | || | || | | | ||||| | || || |||| | || | Sbjct 391992 ---TTTTTCAACNATGGCT-GGGTCTGGTTTGTTCTTCAAATGGGCGAACAACAAGCATG 391937 Query 16239 CAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTG 16298 |||| || ||||| |||||||| |||| || || ||||| ||||| || | ||| | Sbjct 391936 CAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAAAAGGTTAAACCGG 391877 Query 16299 GCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATAC 16358 |||| | |||| ||||| | ||| || || | |||||| ||||| || || || | || Sbjct 391876 GCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCGGAGAAAAAGACAC 391817 Query 16359 CTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttctatcc 16418 |||||| | |||||| ||||| | || ||||| || | || |||| Sbjct 391816 CTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCGTCAGCGTCTTGAATCC 391757 Query 16419 attttttagcccaatttgctttttgtttAACACAGTTC----ATGTTCTCTATTGCATTA 16474 || || |||||| | || | | | || | ||| ||| | | || ||||| Sbjct 391756 ATCTTAAAGCCCATTCGGCCT----TCTCACCGATTTCTGGGATGGTGTGAATGGCATTG 391701 Query 16475 AATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATT 16534 || || | | ||||||| || || |||||||| || | || || || Sbjct 391700 AACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAAGTATCGATCAACAAGGAGTAAGTT 391641 Query 16535 TCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATT 16594 || || |||||||| || || || || ||||| || || | | || || | ||| Sbjct 391640 TCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTCTTTGCCTCTGGAATT 391581 Query 16595 TGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCA 16654 || ||||| | | | || |||| | |||||||| ||||| || || || ||| || Sbjct 391580 TGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATACCGTCAGAAGCGGCG 391521 Query 16655 AAAAACGCAAGTA-TGTGTTTAATAAAAtttttttCGTTATCTGAAAGT---TTTAACCA 16710 ||||| ||||| | | || ||| ||| | | ||||| || | | || ||| Sbjct 391520 AAAAAGGCAAGAACTCTG-GAAATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTCCA 391462 Query 16711 GTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGC 16761 |||| | ||| || || ||||| | ||||| | ||||| |||||||| Sbjct 391461 GTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAAGAAGC 391411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462511901716200