Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001670995.1_202016-06-
20] 17 sequences; 12,124,525 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq12 109 5e-19
seq9 95.1 1e-14
>seq12
Length=1077438
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || | |||||| | ||| | |||| || ||||| ||||| |||||||| || |
Sbjct 64352 ACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGA 64411
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| ||| | ||||||| |||||||| |||||| | || | || ||| || || |||||
Sbjct 64412 CAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGG 64471
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|| ||||| || || || ||||| ||| || || | || || || || ||
Sbjct 64472 GATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAAC 64531
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||| ||| | ||| || ||||||||||| || || || || |||||
Sbjct 64532 CTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 64579
Score = 109 bits (120), Expect = 5e-19
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 64229 CTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCG 64288
|| ||||| ||||| | || || || || |||||||||||||| | | || | ||
Sbjct 64593 CTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCG 64652
Query 64289 TCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTT 64348
||||| |||||||| |||||| | || | | || || || ||||| || ||||| ||
Sbjct 64653 TCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTG 64712
Query 64349 TCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACG 64408
||||| ||||| ||| || || | ||||| | || ||||| | |||| |
Sbjct 64713 TCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATG 64772
Query 64409 GTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| || ||||||||||| || |||||||| |||||
Sbjct 64773 GTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 64807
Score = 107 bits (118), Expect = 2e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || | |||||| | ||| | ||| | ||| || ||||| |||||||| ||||| |
Sbjct 64124 ACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGA 64183
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| || | ||||||| || ||||| |||||| |||| | | || || || |||||
Sbjct 64184 CAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGG 64243
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||| ||||| || ||||| ||||| ||| || || | || ||| | || ||
Sbjct 64244 AATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATAGTGTCAGAAGATTCAAC 64303
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||| |||| ||||| || |||| || || || |||||||||||
Sbjct 64304 CTCTAGGGTTATAGTCTTACCTGTCAGNGTNTTGACNAAAATTTGCAT 64351
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || | ||| || | || || |||| || || || |||||||| ||||| || |
Sbjct 63668 ACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGA 63727
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| || | | ||||| || ||||| |||||| |||| | | |||||||| |||||
Sbjct 63728 CAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGG 63787
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||| ||||| || ||||| ||||| ||| || || | || ||| | || ||
Sbjct 63788 AATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAAC 63847
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||| |||| ||||| || |||| || || || |||||||||||
Sbjct 63848 CTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 63895
Score = 93.3 bits (102), Expect = 4e-14
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || | || ||| | ||| | |||| || ||||| ||||| |||||||| || |
Sbjct 63896 ACCACCTCTCANTCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGA 63955
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| ||| | | ||||| || ||||| || ||| |||| | | ||| || || |||||
Sbjct 63956 CAAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGG 64015
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|| |||||||| ||||| || || || || || | || || | || ||
Sbjct 64016 GATACCTTCTTTATCTTGAATNTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAAC 64075
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||| |||| ||||| || || | |||||| ||||||||||||||
Sbjct 64076 CTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 64123
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || | |||||| | || | || | || ||||| ||||| |||||||| || |
Sbjct 498774 ACCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGA 498715
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| || | | ||||| | ||||| || ||| | || | | || ||||| || ||
Sbjct 498714 CAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 498655
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||| ||||| || ||||| || || ||| ||| || | || ||| | || ||
Sbjct 498654 AATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 498595
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
||| | || | ||||| ||||| ||||| || |||||||||||||| ||
Sbjct 498594 TTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 498544
>seq9
Length=438293
Score = 95.1 bits (104), Expect = 1e-14
Identities = 153/220 (70%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || | |||||| | |||| || | || |||||||||||||||||||| || |
Sbjct 68359 ACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGA 68300
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| ||| | ||||||| | ||||| || ||| | || | | || ||||| || ||
Sbjct 68299 CAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 68240
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|| ||||| || ||||| || ||| ||| ||| || | || ||| | || ||
Sbjct 68239 GATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 68180
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAA 64435
||| | ||| | |||||| || |||||||| || || |||
Sbjct 68179 TTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAAA 68140
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499644693825480
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