Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001670995.1_202016-06- 20] 17 sequences; 12,124,525 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq12 158 1e-33 seq9 114 1e-20 seq11 102 8e-17 >seq12 Length=1077438 Score = 158 bits (174), Expect = 1e-33 Identities = 173/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || ||||| | || |||||| | ||| || || ||||||||||| ||||||||||| | | Sbjct 63897 CCACCTCTCANTCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 63956 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | | | || || || || || || ||||||||||| | ||| ||||| || || Sbjct 63957 AAGGTTCTACCA-TCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGG 64015 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || |||||||| |||||||| || |||||| ||| | |||||||| ||||| || Sbjct 64016 GATACCTTCTTTATCTTGAATNTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAAC 64075 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || || || |||| |||||| |||||||||||||| Sbjct 64076 CTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 64123 Score = 143 bits (158), Expect = 3e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || ||||| | || |||||| | ||| || || ||||||||||| ||||||||||| | | Sbjct 64353 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 64412 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || ||| | ||| || ||||| || || ||||| ||||| | ||| ||||| || || Sbjct 64413 AA-GGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGG 64471 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || ||||| || || || ||||| || || || | |||||||| ||||| || Sbjct 64472 GATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAAC 64531 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | ||| |||||||||||||| ||||| ||||| || || ||||| Sbjct 64532 CTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 64579 Score = 136 bits (150), Expect = 4e-27 Identities = 171/232 (74%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC-C 134545 || ||||| | || ||| || | |||||| || ||||||||||| |||||||||||| | Sbjct 498773 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 498714 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | | | || || | || || || ||||| ||||| | || || || || || Sbjct 498713 AAAGTTCTACCA-TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 498655 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || ||||| || ||||| || || ||||| ||| | ||||| || ||||| || Sbjct 498654 AATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 498595 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 || || ||||| || |||||||||||||| || |||||||||||||| ||| Sbjct 498594 TTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTTG 498543 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || ||||| || | | ||| || |||| ||||| ||||| ||||||||||| || | | Sbjct 64581 CCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGAC 64640 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 | || | | | ||| || ||||| || || ||||| ||||| | || ||||| || || Sbjct 64641 AGCGTTCT-ACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGG 64699 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || ||||| || ||||||||||| || || ||| | || ||||| ||||| || Sbjct 64700 GATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAAC 64759 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || |||||||||||||| ||||| || |||||||| ||||| Sbjct 64760 TTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 64807 Score = 118 bits (130), Expect = 1e-21 Identities = 156/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 134501 CAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGT 134559 ||| || ||||| || ||||| ||||||||||| |||||||| | || || | | | | Sbjct 63683 CAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCA-T 63741 Query 134560 CGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTT 134619 | || || || || || ||||||||||| | ||||| || || || || ||||| || | Sbjct 63742 CTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGT 63801 Query 134620 CTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGG 134679 |||||||||| || || ||| | ||||| || ||||| || || || || || | Sbjct 63802 CTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAG 63861 Query 134680 TTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | ||||| || | || || || ||||||||||| Sbjct 63862 TCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 63895 Score = 109 bits (120), Expect = 6e-19 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || ||||| | || |||||| | || | ||| || || || |||||||| || || | | Sbjct 64125 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 64184 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 | || | | | ||| || || || || || ||||||||||| | || ||||| || || Sbjct 64185 AGCGTTCT-ACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGG 64243 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || ||||| || ||||||||||| || || ||| | ||||| || ||||| || Sbjct 64244 AATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATAGTGTCAGAAGATTCAAC 64303 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || ||||| || | || || || ||||||||||| Sbjct 64304 CTCTAGGGTTATAGTCTTACCTGTCAGNGTNTTGACNAAAATTTGCAT 64351 >seq9 Length=438293 Score = 114 bits (126), Expect = 1e-20 Identities = 159/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || ||||| | || ||| || | ||| | |||||||| ||||||||||||||||| | | Sbjct 68358 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 68299 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || ||| | ||| || | || || || ||||| ||||| | || || || || || Sbjct 68298 AA-GGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 68240 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || ||||| || |||||||| ||| ||||| ||| | ||||| || ||||| || Sbjct 68239 GATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 68180 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAA 134705 || | ||| ||||| ||||| || ||||| || || ||| Sbjct 68179 TTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAAA 68140 >seq11 Length=665086 Score = 102 bits (112), Expect = 8e-17 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || ||||| | || || || | |||| |||||||||||||| ||||||||||| Sbjct 617365 CCACCTCTTAATCTCANGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 617424 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | ||| || | || || || ||||| ||||| | || || || || || Sbjct 617425 AGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 617484 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || ||||| || || ||||| ||| | ||||| || ||||| || Sbjct 617485 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACT 617544 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAA 134704 || | ||| ||||| ||||| || ||||| |||||||| Sbjct 617545 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 617582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505398292602840