Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671025.1_202016-06- 20] 17 sequences; 12,111,362 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq12 93.3 4e-14 >seq12 Length=1076962 Score = 93.3 bits (102), Expect = 4e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||||| ||||||||| ||||| || |||||||| || ||| ||| || ||||| Sbjct 64231 ATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTAGCTG 64290 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 ||| || || | || | | || || || |||||||| ||||||||||| ||| || Sbjct 64291 CTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTC-TTGAATTT 64349 Query 133577 TTG-CTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | | ||| | | || | || |||| | || || || | || | |||||| |||| Sbjct 64350 TCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTACCGG 64409 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 ||| ||| || |||||||||||||| Sbjct 64410 TCAAAGTCTTGACGAAAATCTGCAT 64434 Score = 87.8 bits (96), Expect = 2e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564 ||| || |||||||| || || | || | || ||| || || |||||||| |||||||| Sbjct 64051 GTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTT 64110 Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 ||| ||| || ||| | | || | |||||||| || || || || | |||| Sbjct 64111 GTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGAT 64170 Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 |||||| ||||||| ||| || || || |||||||| Sbjct 64171 GGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 64206 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/207 (70%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||| | || ||||||||||| || || ||||| || ||| ||| || || Sbjct 63773 AAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCTTCCAGT 63832 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| || || |||| | | || || || ||||| || ||||||||||| ||| Sbjct 63833 TGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTC-TTGAAT 63891 Query 133575 TTTTG-CTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| | ||||| | |||| ||||||| | || || || | ||| | || || || Sbjct 63892 TTTCGACTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCC 63951 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 || |||||||| |||||||| ||||| Sbjct 63952 TGTTAGAGTTTTGACGAAAATTTGCAT 63978 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420697273080