Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671025.1_202016-06-
20] 17 sequences; 12,111,362 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq5 293 3e-74
>seq5
Length=573974
Score = 293 bits (324), Expect = 3e-74
Identities = 909/1389 (65%), Gaps = 42/1389 (3%)
Strand=Plus/Minus
Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766
||| || || | ||| |||||| || |||||||||| |||||| ||||| | |||||
Sbjct 299642 GTACATATTGGAAGTGACTGGTTCGAAACATTCATTATAACCCAATATTTGGGATGTGGA 299583
Query 110767 GGCTGTTGGCATTGGTGCCATCA--AAAGACTGTTACGAAGACCCTTCTCCTTGATG-CG 110823
|| || |||||||||||||| || || | | | || ||| | || | |||| |
Sbjct 299582 TGCAGTAGGCATTGGTGCCATGGTCAAGGAATTT--CTAATACCATGCTTCATGATATCT 299525
Query 110824 TTCCTTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTG 110883
|| ||| || ||||| || | || | || || |||||||| ||||||||
Sbjct 299524 TTTCTTAAGGTG-TCCCAATCCCACATGCCGTAGGGTTTTTGGTCCCACATATCAAACTG 299466
Query 110884 AAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTC--A 110941
|| | ||||| || || ||||| || | || ||||| || | ||| | |||| |
Sbjct 299465 TAGTATACCTTGAGAAGCAGGAGATCCTTGGAAAGTTTCGTATGGACCGTC--CTTCTGA 299408
Query 110942 GCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTC 111001
|| | |||||| || |||| ||| || ||||| || ||||||||||| | |||
Sbjct 299407 GCTAGTTCACAAGAAGCTTCCATGGAGGCATGATAAATAGTTTCAAAGATTTGGATATTT 299348
Query 111002 ATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGA 111061
| | |||||| || |||||||||| | || ||| || || || ||||||
Sbjct 299347 AGCAAACGGGCTTCCTCAGAATCAAATGGCAAACGTAACAGCATGAAAGTGTCAGCGAGA 299288
Query 111062 CCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACG 111121
||||||||||||||| |||| ||||| |||| |||||| || |||| ||| |||||
Sbjct 299287 CCTTGAACACCCAAAGCAATTGGTCTATGTCTCATATTGGATTTTCTCGCTTCTTCAACA 299228
Query 111122 GGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCA 111181
|| || |||| | |||||||||| ||||| ||| ||||||| || | ||||||
Sbjct 299227 GGGTAGTAATTACGATCAATGACTCTGTTTAAATTACGAGTAACAACTTTAGCAATTTCA 299168
Query 111182 TGAAGTTTTTCATAATCAAAAGTGCGAGTCT---------------CTTCATTGACATAC 111226
|| | ||||| | | | ||| ||||| |||| ||| || |
Sbjct 299167 TGTAATTTTTTGAAGTTGTATGTGGAAGTCTTACCATCCTCAGAAGTTTCAATGA-ATGC 299109
Query 111227 TTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCT 111286
||| | ||| | || ||||| || |||||||| || ||||| | ||| ||| ||
Sbjct 299108 --TGGTAAGGCAACGGAAGCCAAGTTACAAACAGCAGTTTCATCTGGAGCTGAGTATTCA 299051
Query 111287 AAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTC 111346
| |||||| |||||||| || ||| || || || || ||||| ||| ||
Sbjct 299050 ACAATTTCACAGCATAAGTTTGATGACTTGATGACACCTAAGTTTTTTTGATTAGATTTT 298991
Query 111347 TTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGA 111406
|||| || ||||||||||| | | | | || || || || || || || | || | |
Sbjct 298990 CTGTTACAAGCATCCTTGTAAACAACGAAAGGTGTACCAGTTTCAGTTTGAGCTTCCAAA 298931
Query 111407 ATAGCCTTCCAAACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTAC 111466
|| | | ||| | || || | | || | || | || || || ||||||
Sbjct 298930 ATGGAATACCATA-ATTTTTGG--GCTTTGATAGTCTTACCACGACCTTCTTTCTCGTAG 298874
Query 111467 TTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGC-CTTGTC 111525
|| || || || |||||||| ||||| ||| | ||| || || |||
Sbjct 298873 CGGGTATATAGAGCCTCAAACTCGTCACCGTAACAATCGCTTAAACCAGGAGCTGATGT- 298815
Query 111526 TGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAAT 111585
|||| |||| | | ||| ||| ||| || || |||||||||||||| || |||||
Sbjct 298814 TGGAGAGAATAATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAAT 298755
Query 111586 CCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA 111645
||| || | | || | |||||| ||| || || | ||| ||||| || |||
Sbjct 298754 CCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTGGTT-CTTCCTAA 298696
Query 111646 -CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC-- 111702
|||| || || | ||||| || |||||||| || || || | || | | ||
Sbjct 298695 TATCAATAAAATCAAATATATCAGCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAG 298636
Query 111703 --CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATT 111760
|||| | ||| | || | ||||| || || ||| || || || |||| |||
Sbjct 298635 GTCTTT-TATTACCACCCTGGTCAACATAACGGGCAGTGTTATTGAAAACACGAATCATA 298577
Query 111761 GGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACA 111820
||||| | ||| | || ||| ||||| || ||| ||| | | | | |
Sbjct 298576 GGAATTAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATG 298517
Query 111821 TCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGA 111880
| |||||| || | |||||||| ||||| || || || ||||| ||| | |
Sbjct 298516 TTATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAG 298457
Query 111881 GTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATC 111940
|| | || || || | ||| ||||||||||| |||| | | ||| ||| ||||||
Sbjct 298456 GTGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAACAAGAGGACATT 298397
Query 111941 TGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT-G 111999
|| ||| |||| ||||| |||||||| | ||||| | |||||| | || ||| || |
Sbjct 298396 TGAGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGCGTGAGT-AAAATATTTTAG 298338
Query 112000 GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGC 112059
|||||| || || || || || ||| || || ||| ||||||||||| | |||
Sbjct 298337 AGACATCAAGTTATACGTTTCTAAAGCAGCCTCGATATCTCTACCGTGGATGCCTAGTGC 298278
Query 112060 GACCCGCAT 112068
||| | |||
Sbjct 298277 GACTCTCAT 298269
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628031866543200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |