Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671025.1_202016-06- 20] 17 sequences; 12,111,362 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq12 98.7 7e-16 >seq12 Length=1076962 Score = 98.7 bits (108), Expect = 7e-16 Identities = 163/233 (70%), Gaps = 12/233 (5%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||||||||| || |||||||| || ||||| ||| || | || || ||| || Sbjct 63978 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 63919 Query 27850 GACGATGT--ACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| | | |||| ||||| ||||| ||||| |||||| |||| || | Sbjct 63918 GACACTATTGACAAC--GTCAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGATC 63861 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACG----AACGCAGCTTGTCCGAT 27963 | ||| | || ||||||||||| || ||| |||| |||| ||||| |||| ||| Sbjct 63860 AACAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGC----TGTCTGAT 63805 Query 27964 TACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 || ||||| || |||||| || ||||||||||| ||| | ||| | || || Sbjct 63804 TATAACATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGG 63752 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||||||||| || |||||||| || ||||| ||| || | || || ||| || Sbjct 63750 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 63691 Query 27850 GACGATGT--ACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| | | |||| |||||| || || || ||||||||| | || ||| | Sbjct 63690 GACACTATTGACAAC--GTCAAAAGTAAGATTCAAGATAAAGAAGGTATCCCTCCGGATC 63633 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 | || | || |||||||| || || ||| | || |||| | | |||||| || |||| Sbjct 63632 AACAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGACGGTAGAACCTTGTCTGACTACA 63573 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 |||||||||| || ||| | || ||||| ||| | ||| | || || Sbjct 63572 ACATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 63524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355862326269759