Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671055.1_202016-06-
20] 17 sequences; 12,120,870 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq5 295 8e-75
>seq5
Length=576086
Score = 295 bits (326), Expect = 8e-75
Identities = 907/1387 (65%), Gaps = 38/1387 (3%)
Strand=Plus/Minus
Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766
||| || || | ||| |||||| || |||||||||| |||||| ||||| | |||||
Sbjct 300394 GTACATATTGGAAGTGACTGGTTCGAAACATTCATTATAACCCAATATTTGGGATGTGGA 300335
Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATG-CGTT 110825
|| || |||||||||||||| || || | || ||| | || | |||| | ||
Sbjct 300334 TGCAGTAGGCATTGGTGCCATGGTCAGGGAATTTCTAATACCATGCTTCATGATATCTTT 300275
Query 110826 CCTTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGAA 110885
||| || ||||| || | || | || || |||||||| |||||||| |
Sbjct 300274 TCTTAAGGTG-TCCCAATCCCACATGCCGTAGGGTTTTTGGTCCCACATATCAAACTGTA 300216
Query 110886 GCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTC--AGC 110943
| | ||||| || || ||||| || | || ||||| || | ||| | |||| |||
Sbjct 300215 GTATACCTTGAGAAGCAGGAGATCCTTGGAAAGTTTCGTATGGACCGTC--CTTCTGAGC 300158
Query 110944 CAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCAT 111003
| |||||| || |||| ||| || ||||| || ||||||||||| | ||| |
Sbjct 300157 TAGTTCACAAGAAGCTTCCATGGAGGCATGATAAATAGTTTCAAAGATTTGGATATTTAG 300098
Query 111004 CTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACC 111063
| |||||| || |||||||||| | || ||| || || || ||||||||
Sbjct 300097 CAAACGGGCTTCCTCAGAATCAAATGGCAAACGTAACAGCATGAAAGTGTCAGCGAGACC 300038
Query 111064 TTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGG 111123
||||||||||||| |||| ||||| |||| |||||| || |||| ||| ||||| ||
Sbjct 300037 TTGAACACCCAAAGCAATTGGTCTATGTCTCATATTGGATTTTCTCGCTTCTTCAACAGG 299978
Query 111124 ATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATG 111183
|| |||| | |||||||||| ||||| ||| ||||||| || | ||||||||
Sbjct 299977 GTAGTAATTACGATCAATGACTCTGTTTAAATTACGAGTAACAACTTTAGCAATTTCATG 299918
Query 111184 AAGTTTTTCATAATCAAAAGTGCGAGTCT---------------CTTCATTGACATACTT 111228
| ||||| | | | ||| ||||| |||| ||| || |
Sbjct 299917 TAATTTTTTGAAGTTGTATGTGGAAGTCTTACCATCCTCAGAAGTTTCAATGA-ATGC-- 299861
Query 111229 TGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAA 111288
||| | ||| | || ||||| || |||||||| || ||||| | ||| ||| || |
Sbjct 299860 TGGTAAGGCAACGGAAGCCAAGTTACAAACAGCAGTTTCATCTGGAGCTGAGTATTCAAC 299801
Query 111289 AATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTT 111348
|||||| |||||||| || ||| || || || || ||||| ||| || |
Sbjct 299800 AATTTCACAGCATAAGTTTGATGACTTGATGACACCTAAGTTTTTTTGATTAGATTTTCT 299741
Query 111349 GTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAAT 111408
||| || ||||||||||| | | | | || || || || || || || | || | |||
Sbjct 299740 GTTACAAGCATCCTTGTAAACAACGAAAGGTGTACCAGTTTCAGTTTGAGCTTCCAAAAT 299681
Query 111409 AGCCTTCCAAACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTT 111468
| | ||| | || || | | || | || | || || || ||||||
Sbjct 299680 GGAATACCATA-ATTTTTGG--GCTTTGATAGTCTTACCACGACCTTCTTTCTCGTAGCG 299624
Query 111469 TGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGC-CTTGTCTG 111527
|| || || || |||||||| ||||| ||| | ||| || || ||| ||
Sbjct 299623 GGTATATAGAGCCTCAAACTCGTCACCGTAACAATCGCTTAAACCAGGAGCTGATGT-TG 299565
Query 111528 GACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCC 111587
|| |||| | | ||| ||| ||| || || |||||||||||||| || |||||||
Sbjct 299564 GAGAGAATAATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCC 299505
Query 111588 ACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA-C 111646
| || | | || | |||||| ||| || || | ||| ||||| || |||
Sbjct 299504 ATAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTGGTT-CTTCCTAATA 299446
Query 111647 TCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC---- 111702
|||| || || | ||||| || |||||||| || || || | || | | ||
Sbjct 299445 TCAATAAAATCAAATATATCAGCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAGGT 299386
Query 111703 CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGG 111762
|||| | ||| | || | ||||| || || ||| || || || |||| ||| ||
Sbjct 299385 CTTT-TATTACCACCCTGGTCAACATAACGGGCAGTGTTATTGAAAACACGAATCATAGG 299327
Query 111763 AATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATC 111822
||| | ||| | || ||| ||||| || ||| ||| | | | | | |
Sbjct 299326 AATTAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATGTT 299267
Query 111823 ATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGT 111882
|||||| || | |||||||| ||||| || || || ||||| ||| | | ||
Sbjct 299266 ATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAGGT 299207
Query 111883 TCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTG 111942
| || || || | ||| ||||||||||| |||| | | ||| ||| |||||| ||
Sbjct 299206 GTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAACAAGAGGACATTTG 299147
Query 111943 CGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT-GGG 112001
||| |||| ||||| |||||||| | ||||| | |||||| | || ||| || | |
Sbjct 299146 AGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGCGTGAGT-AAAATATTTTAGAG 299088
Query 112002 ACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGA 112061
||||| || || || || || ||| || || ||| ||||||||||| | |||||
Sbjct 299087 ACATCAAGTTATACGTTTCTAAAGCAGCCTCGATATCTCTACCGTGGATGCCTAGTGCGA 299028
Query 112062 CCCGCAT 112068
| | |||
Sbjct 299027 CTCTCAT 299021
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628031866543200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |