Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671115.1_202016-06-
20] 17 sequences; 12,125,340 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq12 127 1e-24
>seq12
Length=1077859
Score = 127 bits (140), Expect = 1e-24
Identities = 169/232 (73%), Gaps = 10/232 (4%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| ||||| || || || || || || || || || || || || ||||| || |
Sbjct 64745 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 64686
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|||||| |||| || |||| | |||| || ||||| |||||| | || ||||||||
Sbjct 64685 GACACTATTGACAACGTTAAGTCGAAAA-TTCAAGACAAGGAAGGTATTCCTCCAGATCA 64627
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGAC----GAACGCACTTTAGGCGATT 23785
||| | || || |||||||| || |||||||||||| |||||| | | ||||
Sbjct 64626 ACAAAGATTGATNTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCT----GATT 64571
Query 23786 ACAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
| ||||| || |||||||| || || ||||| || || || ||| |||| ||
Sbjct 64570 ATAACATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGG 64519
Score = 113 bits (124), Expect = 3e-20
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || || | || || ||||| || || | |||||||| || |
Sbjct 65201 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 65142
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| || | || || |||| | |||| || ||||| |||||| | || ||||||||
Sbjct 65141 GATACCATCGACAACGTTAAGTCGAAAA-TTCAAGACAAGGAAGGTATCCCTCCAGATCA 65083
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | || || |||||||| || || || ||||||| | || | ||||||||
Sbjct 65082 ACAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGNAGAACGCTGTCTGATTACAA 65023
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
||| || || |||||||| |||||| | || ||||| | |||| ||
Sbjct 65022 CATTCAGAAGGAGTCCACCTTACATCTTGTGCTAAGGCTAAGAGGTGG 64975
Score = 109 bits (120), Expect = 4e-19
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || ||||| || | || || ||||| |||||| | || || || ||| |
Sbjct 64973 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTNGAATCCTCC 64914
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || || |||| | |||| | ||||| |||||| | || ||||||||
Sbjct 64913 GACACGATCGATAACGTTAAGTCGAAAA-TCCAGGACAAGGAAGGTATCCCTCCAGATCA 64855
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||| | || || |||||||| || || || ||||||| | || || || |||||
Sbjct 64854 ACAGAGGTTGATNTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAA 64795
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
||| ||||| || || || | || || || || || ||| |||| ||
Sbjct 64794 CATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 64747
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338009529968636
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |