Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671165.1_202016-06-
20] 17 sequences; 12,120,079 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq5 197 4e-45
seq9 196 1e-44
seq15 122 2e-22
>seq5
Length=575542
Score = 197 bits (218), Expect = 4e-45
Identities = 698/1076 (65%), Gaps = 57/1076 (5%)
Strand=Plus/Plus
Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606
|| || |||||| | ||||| ||| |||||| || |||| || || || ||||| |||
Sbjct 298882 TTTACTCACGCCTCTCCAACGTTGTTCAATGCCGGTACTCCAAAACCTCAAATGTCCTCT 298941
Query 363607 TGCTTTCTTC-TAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAA 363665
|| |||||| | |||||||| || || |||||||| || | ||||| | ||| |
Sbjct 298942 TG-TTTCTTGGTTGCCATGAAGGAGGACTCTATCGAGGGGATTTACGACACCTTGAAGGA 299000
Query 363666 TTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC 363725
|||||| | |||||||| | ||| || || |||||| || ||||| || ||||| |
Sbjct 299001 ATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGTCTACATATCCATAACATTCGTTC 299060
Query 363726 ACAGAACAG----TTACATTCGCGGCACAGGGGGATACT-CGAATGGGCTGGTTCCCATG 363780
| || | ||||||| || ||| || |||| | || || | |||| |||
Sbjct 299061 A----ACTGGTTCTTACATTGCTGGTACAAACGG-TACTTCTAACGGTTTAATTCCTATG 299115
Query 363781 CTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGG--AGGAAAGCGCAAAG 363838
||||||| || | || ||||| | || || ||||||||||| | |||| | |
Sbjct 299116 ATTCGTGTTTTCAATAACACTGCCCGTTATGTTGACCAGGGTGGTAATAAAAGACC--TG 299173
Query 363839 GGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCC 363898
| |||||||| | || || || || ||||| ||||| ||||| ||| |||| |
Sbjct 299174 GTGCGTTTGCCCTTTACCTGGAACCATGGCATGCTGATATATTTGATTTTATTGATATTA 299233
Query 363899 GGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTT 363958
|||| ||| || ||||||||| | |||||| | ||| ||||| ||| || ||| ||
Sbjct 299234 GGAAGAACCACGGTAAAGAGGAAATTCGTGCAAGAGATTTGTTCCCTGCTCTATGGATTC 299293
Query 363959 CTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACG 364018
|||| | ||| |||||||| || || | | | || ||| || | || | |||
Sbjct 299294 CTGATCTTTTCATGAAGCGTGTCGAAGAAAATGGGACCTGGACATTATTCTCTCCAACAT 299353
Query 364019 AATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATG 364078
| ||| ||| | |||| | |||||||| | || |||||||| || |
Sbjct 299354 CAGCTCCTGGTTTAAGCGATTGTTACGGTGACGAGTTTGAGGCTCTATATACCCGCTACG 299413
Query 364079 AATCGGAGGGAAAGGC-TCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATG 364137
| || ||| | | | ||||||| || || || || |||||| | |||| ||
Sbjct 299414 A----GAAAGAAGGTCGTGGTAAGACTATCAAAGCCCAAAAATTATGGTATTCCATTTTG 299469
Query 364138 GATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAG 364197
|| | || | ||| || || ||||| | | | ||||| ||| | || ||| | ||
Sbjct 299470 GAAGCTCAAACTGAAACTGGTACACCTTTCGTTGTTTACAAGGATGCTTGTAACAGAAAA 299529
Query 364198 TCCAACCAGCAGCACCTTGGT----ACAATTCAGCAGAGCAACCTATGTACCGAGATTAT 364253
|| || || | || | ||| ||| ||| || ||| |||| || ||| |
Sbjct 299530 TCTAATCAAAAAAACTTAGGTGTCATCAAGTCATCA----AACTTATGCTGTGAAATTGT 299585
Query 364254 TGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGC 364313
||||||| | ||||| || || ||||| || |||||| | || || | || | || ||
Sbjct 299586 TGAATACTCAGCTCCAGATGAAACTGCTGTTTGTAACTTGGCTTCCGTTGCCTTACCAGC 299645
Query 364314 GT---TTGTAA------AAGATGGT---ACTTTTGACCAC---CAGCATC-------TTT 364351
| ||| || | |||||| |||| |||| || | || |
Sbjct 299646 ATTCATTGAAACTTCTGAGGATGGTAAGACTT----CCACATACAACTTCAAAAAATTAC 299701
Query 364352 ATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATC 364411
|||| | | | || |||| | ||| | ||| || || || ||||| || |
Sbjct 299702 ATGAAATTGCTAAAGTTGTTACTCGTAATTTAAACAGAGTCATTGATCGTAATTACTACC 299761
Query 364412 CAATTCCTGAAGCCGAG-CGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAG 364470
| || |||| |||| || |||||| | ||| | || |||| | | ||||| ||
Sbjct 299762 CTGTTGAAGAAG-CGAGAAAATCCAATATGAGACATAGACCAATTGCTTTGGGTGTTCAA 299820
Query 364471 GGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTT 364530
|| ||||||||| ||| ||| || | || |||||||||| || || ||| |
Sbjct 299821 GGTCTCGCTGACACTTTCATGCTGTTACGTTTGCCATTTGATTCTGAGGAAGCCCGTTTG 299880
Query 364531 CTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGA 364586
||||||| | ||||||||||| || ||| |||| | ||| ||||| |||||
Sbjct 299881 CTAAATATCCAAATCTTTGAAACTATTTATCATGCCTCCATGGAAGCTTCTTGTGA 299936
>seq9
Length=437167
Score = 196 bits (216), Expect = 1e-44
Identities = 1068/1681 (64%), Gaps = 49/1681 (3%)
Strand=Plus/Minus
Query 363364 TATGAGAAGGATCTCGAGTATGATATTTTCGGATATAAGACGATGGAGAAATCCTACCTA 363423
|| || | |||| || ||||| |||||||| ||||| ||||| || ||| |
Sbjct 239195 TACGATAGGGATTTCCAGTATACGTATTTCGGATTCAAGACACTGGAGCGTTCGTACTTG 239136
Query 363424 TCTCGTATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATT 363483
| | || ||||| | | ||||| || |||||| || |||||||||| || |
Sbjct 239135 CTAAGACTGAACGGTGAAGTGGCAGAACGTCCTCAGCATTTGGTAATGCGTGTGGCGCTA 239076
Query 363484 GGTATCCATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGT 363543
||||||||| | ||| | || | | | | | || ||||| || | || |
Sbjct 239075 GGTATCCATGGTAGCGATATCGAATCTGTGCTGAAGACTTATAA--TTTGATGTCGTTAA 239018
Query 363544 G-TA-TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGT 363601
| || ||||| ||||| | ||||| | | ||| ||||| || | |||| || ||||
Sbjct 239017 GATACTTCACTCACGCTTCCCCAACTTTATTCAACGCTGGTACGCCACATCCTCAAATGT 238958
Query 363602 CTTCTTGCTTTCTTC-TAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTT 363660
|||| || |||||| | |||||||| || || ||||| ||||| | ||| || |
Sbjct 238957 CTTCATG-TTTCTTAATTGCCATGAAGGATGACTCTATCGAAGGTATTTATGATACTTTG 238899
Query 363661 AAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTT 363720
|| | |||||| | |||||||| | |||||| || ||||| | ||| |||| |
Sbjct 238898 AAAGAATGTGCTATGATTTCCAAAACTGCAGGTGGTGTTGGTCTTCATATCAACAACATC 238839
Query 363721 CGTGC-ACAGAACAGTTACATTCGC-GGCACAGGGGGATACT-CGAATGGGCTGGTTCCC 363777
||| | |||| ||| || ||| || || || |||| | || ||| || ||||
Sbjct 238838 CGTTCCACAGGTTC-TTATAT-CGCTGGTACCAACGG-TACTTCAAACGGGTTGATTCCT 238782
Query 363778 ATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAA 363837
||| ||||||| || | |||||||| | || || ||||||||||| ||| |
Sbjct 238781 ATGATTCGTGTTTTCAATAATACTGCCCGTTATGTGGACCAGGGTGGTAACAAGAGACCT 238722
Query 363838 GGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTC 363897
|| || || || | | | ||||| ||||| ||||| || || ||| | || ||
Sbjct 238721 GGTGCTTTCGCCCTTTTCTTGGAGCCATGGCATGCAGATATCTTCGACTTTGTCGATATC 238662
Query 363898 CGGAAAAACACG-GGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGT 363956
| |||||||| || || || ||| | |||||| | ||| ||||| ||| || ||| |
Sbjct 238661 AG-AAAAACACATGGTAAGGAAGAAATTCGTGCAAGAGATTTGTTCCCTGCTCTATGGAT 238603
Query 363957 TTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACA 364016
|||| | ||| ||||| || || | | | | | |||| | | |||| || ||
Sbjct 238602 CCCTGATCTTTTCATGAAACGTGTTCAAGAGGATGGGCCTTGGACTTTGTTTTCGCC-CA 238544
Query 364017 CGAATGTCC-AGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGT 364075
|| || |||| | ||||| |||||||| || | || | ||||| |
Sbjct 238543 GTGCTGCCCCAGGTTTAGATGATGTGTGGGGTGATGAATTTGAAGAACTATATACTCGTT 238484
Query 364076 ATGAATCGGAGGGAAAGGC-TCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATC 364134
| ||| || ||| | | | |||| |||||| || || ||| | |||| ||||||
Sbjct 238483 ACGAA----AGAGAAGGTCGTGGTAAAACAATTAAAGCCCAAAAGTTGTGGTATGCCATT 238428
Query 364135 ATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGC 364194
|| | | |||| || ||||| ||||| | ||| | || || || | || ||| |
Sbjct 238427 TTGCAAGCACAGACAGAAACAGGTACACCTTTCATGGTTTATAAGGACGCATGTAACAGG 238368
Query 364195 AAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGC-AACCTATGTACCGAGATTAT 364253
||| | ||||| ||| || | ||||| || || | | || ||||| || || |
Sbjct 238367 AAGACAAACCAACAGAACTTAGGTACTAT-CAAATCATCTAATTTATGTTGTGAAATCGT 238309
Query 364254 TGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGC 364313
||||| || | || || || ||||| || ||||| | || || || || || || ||
Sbjct 238308 CGAATATTCCTCCCCGGATGAAACTGCAGTTTGTAATTTAGCTTCTATTGCCCTACCAGC 238249
Query 364314 GTTTGT---------AAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAAC--- 364361
|| || | ||||||||| || | | || | | || | ||
Sbjct 238248 ATTCGTTGAGGTTTCAGAAGATGGTAAAACTGCAAGCTATAATTTCGA-GAGATTACACG 238190
Query 364362 ------CTA---TCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCC 364412
||| |||| |||| ||| | ||| ||||||||| ||||| |||||
Sbjct 238189 AGATTGCTAAAGTCAT--TACTCACAACTTGAACAGAGTTATCGACCGTAATTACTATCC 238132
Query 364413 AATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGG 364472
| |||| || || ||| |||||| ||| | || |||| ||||||||| |||||
Sbjct 238131 AGTTCCCGAGGCTAGAAATTCAAATATGAAGCATAGACCTATTGCTCTTGGTGTCCAGGG 238072
Query 364473 CCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCT 364532
| || || || ||||||| | | | ||||| ||| | |||| |||
Sbjct 238071 TTTGGCCGATACTTATATGATGTTGCGTCTACCCTTTGAATCGGAAGTAGCTCAAACTCT 238012
Query 364533 AAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGC 364592
||| || | ||||| ||||| || || ||| | | || || ||||| |||||
Sbjct 238011 AAACAAACAAATCTTCGAAACTATTTACCATGCTACTCTTGAAGCCTCCTGTGAATTGGC 237952
Query 364593 A-AAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCC 364651
|||| |||| ||| || ||||||| ||| || || || ||| |||| | || |
Sbjct 237951 CCAAAAAGAAGGTAAA-TATTCTACTTTTGAAGGTTCTCCAGCTTCTAAGGGTATTTTAC 237893
Query 364652 AGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCA 364711
| || ||| | ||||| | | |||| || | ||| | ||||| || || |
Sbjct 237892 AATTCGATATGTGGAACGCTAAACCATTTGGCATGTGGGATTGGGAAACCTTAAGAAAGG 237833
Query 364712 ACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTA 364771
|| || || ||||| | ||||| | || || || ||||| || || || |
Sbjct 237832 ACATTGTTAAACATGGGTTAAGAAACTCTTTGACTATGGCACCAATGCCAACCGCCTCAA 237773
Query 364772 CTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCAC 364831
|| | || || || || | || || ||||||||||| | || || | || || |
Sbjct 237772 CTTCCCAAATTCTTGGTTATAATGAATGCTTCGAACCAGTGACCTCAAACATGTACTCTC 237713
Query 364832 GCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCG 364891
| || || || || || ||||| | || |||||| || || | ||| | ||
Sbjct 237712 GTCGTGTCCTGTCTGGTGAATTCCAAGTTGTTAATCCATATTTACTACGTGATTTAGTCG 237653
Query 364892 ACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGC 364951
||| || | |||| ||| || ||||| | ||| | || | ||||||||| | |
Sbjct 237652 ACCTGGGTATTTGGGATGATAGTATGAAACAATATCTAATTACACAAAATGGTTCTATTC 237593
Query 364952 AGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTT 365011
| | | ||| | ||| |||| ||||| | ||||||||||| |||||||| |
Sbjct 237592 AAGGCTTACCAAATGTGCCACAAGAATTGAAGGAACTATACAAAACCGTCTGGGAAATCT 237533
Query 365012 C 365012
|
Sbjct 237532 C 237532
>seq15
Length=1079310
Score = 122 bits (134), Expect = 2e-22
Identities = 337/514 (66%), Gaps = 32/514 (6%)
Strand=Plus/Minus
Query 111419 TGTAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTCGA 111478
||| || |||||||| || |||||||| ||||| | | ||||| | || | ||
Sbjct 455678 TGTTAAGATTTGGGACGGTAATGGATCTCGTGAATATTTAGATAGGATGGGGTTCAAAGA 455619
Query 111479 CAACGAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGA 111538
| ||| ||| ||||| || || ||||| |||||||||||| | || |||||||| |
Sbjct 455618 TAGGAAAGTAGGAGATCTGGGGCCCGTTTATGGATTTCAATGGAGGCATTTTGGTGCTAA 455559
Query 111539 CTACAAAACCATGC-ACGACTCATATGATTCACAGGGAACTGATCAATTACAGAATGTCA 111597
||||| || ||| | ||| ||| | ||| || | ||||||||| | | || |
Sbjct 455558 ATACAAGACG-TGCGATGACGACTATACTGGACAAGGTATTGATCAATTGAAACAGGTTA 455500
Query 111598 TTGATCAAATTAAGAACAA-CCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCA 111656
|| || || | |||| || ||| || | | | || ||||||||||| |||||||||
Sbjct 455499 TTCATAAACTAAAGACAAATCCCTACGA-TAGAAGAATCATTATGAGTGCCTGGAACCCA 455441
Query 111657 AATGCATTGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATG----- 111711
|| || || |||||||| | |||||||| ||| || | | ||||| ||||
Sbjct 455440 GCTGATTTTGACAAAATGGCTTTGCCACCATGCCATATTTTTTCACAGTTCTATGTCAGT 455381
Query 111712 -TACACGACG--------GGAT-------------GCTTTCATGCCAAATGTATCAGCGA 111749
| | | | | |||| ||||||||| | |||| || ||
Sbjct 455380 TTCCCCAAAGAAGGAGAAGGATCCGGTAAGCCCCGCCTTTCATGCTTATTGTACCAACGT 455321
Query 111750 TCTGCTGATATTGGTCTTGGTGTTCCGTTTAATATTGCAAGTTACGCACTACTTACTTGC 111809
||| |||||| || | || || || ||||| |||||| || || | | ||| |
Sbjct 455320 TCTTGTGATATGGGGTTGGGAGTACCATTTAACATTGCATCATATGCTTTGTTGACTAGA 455261
Query 111810 TTAATCGCTCATTTTACAAATCTCAAACCGGGTGAATTCATTCACGTTATCGGAGATGCG 111869
| || ||| | || | | | || ||||| |||||||| | | || |||||
Sbjct 455260 ATGATTGCTAAAGTTGTCGACATGGAGCCAGGTGAGTTCATTCATACTTTGGGGGATGCA 455201
Query 111870 CATGTTTACACAAACCACATTGATGCACTTAAAA 111903
|||||||| | | ||||||||||||| ||| |||
Sbjct 455200 CATGTTTATAAAGACCACATTGATGC-CTTGAAA 455168
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303353316113294
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