Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671255.1_202016-06-
20] 17 sequences; 12,100,095 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq12 107 1e-18
seq9 102 6e-17
>seq12
Length=1077295
Score = 107 bits (118), Expect = 1e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| ||| || || ||||| ||||| ||||||||||||| || ||| ||| |||||||
Sbjct 498639 ACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCC 498580
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236
||||| || || ||| |||| | ||||||||| || || | |||||||| ||
Sbjct 498579 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGG 498520
Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296
|| | |||||| | ||| ||||||| | || ||| | ||| || | ||
Sbjct 498519 ATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATAGTCTTA 498460
Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328
||||| || || || || ||||||||||| ||
Sbjct 498459 CCGGTTAAAGTCTTGACGAAAATTTGCATCTT 498428
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 18108 AGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTA 18167
||||| | |||| |||||| || ||||| ||||| ||||||||||| | || ||| ||
Sbjct 63790 AGTCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTA 63849
Query 18168 CAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCC 18227
| |||||| | ||| || || ||| | || | ||| ||||||||| || | |||||
Sbjct 63850 CCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCT 63909
Query 18228 TTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTG 18287
||||| ||||| ||||| | ||| |||||| | || || | |||
Sbjct 63910 TTATCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTT 63969
Query 18288 ATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|| | || || || | ||||| || |||||||||||
Sbjct 63970 ATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 64007
Score = 84.2 bits (92), Expect = 2e-11
Identities = 141/204 (69%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 18122 GTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTG 18181
|||||| || || || |||||||| |||||||| | || ||| ||| |||||| | |||
Sbjct 63576 GTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTG 63635
Query 18182 TTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTG 18241
|| || ||| | || | |||||| || || || | |||||||| || |||||
Sbjct 63636 CTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTT 63695
Query 18242 TTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGT 18301
||| || | ||| ||||||| | || || | ||| || | || || ||
Sbjct 63696 CGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGT 63755
Query 18302 CAATGTTTTTACAAAAATTTGCAT 18325
|| ||| || ||||||||||||||
Sbjct 63756 CAGTGTCTTGACAAAAATTTGCAT 63779
>seq9
Length=437830
Score = 102 bits (112), Expect = 6e-17
Identities = 136/189 (72%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 18129 GTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCC 18188
|| ||||||||||||||||||||||| | || ||| ||| ||||||||||| || ||
Sbjct 67894 GTGGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACCGTCTTCCAATTGCTTACCA 67835
Query 18189 GCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTG 18248
||| |||| | ||||||||| || || | |||||||| || ||| | | ||||
Sbjct 67834 GCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGAATCTTTGACTTG 67775
Query 18249 ACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTT 18308
|| | ||| ||||||| | || ||| | |||||| | || || ||||| ||
Sbjct 67774 ACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTC 67715
Query 18309 TTTACAAAA 18317
|| ||||||
Sbjct 67714 TTGACAAAA 67706
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379343921404665
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |