Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671255.1_202016-06-
20] 17 sequences; 12,100,095 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq12 170 2e-37
seq9 109 5e-19
seq11 104 2e-17
>seq12
Length=1077295
Score = 170 bits (188), Expect = 2e-37
Identities = 176/228 (77%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| |||| || | ||||||||||| || || | || || ||| || ||
Sbjct 64463 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 64404
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || |||| ||| | ||| ||||| ||||| ||||| || ||||| |||||
Sbjct 64403 GACACGATCGATAACGTTAAGTCGAAA-ATCCAGGACAAGGAAGGTATCCCTCCAGATCA 64345
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||| | |||||||||||||| || ||||| || || |||| | |||| || || ||
Sbjct 64344 ACAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAA 64285
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||| ||||||||||| || || |||||||||||| ||||| | || ||
Sbjct 64284 CATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 64237
Score = 150 bits (166), Expect = 2e-31
Identities = 172/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||| || || | || || |||||||||| |||||||| || ||||| ||| | |
Sbjct 498430 GATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCTTC 498489
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || |||||||||||||| ||||| || || || || ||
Sbjct 498490 TGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCA 498549
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|||| | ||||||||||| || || || |||| ||| |||| |||| || || ||
Sbjct 498550 ACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAA 498609
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933
||| ||||||||||| || ||||||||||| ||| ||||| | || || ||
Sbjct 498610 CATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGGTGG 498660
Score = 143 bits (158), Expect = 2e-29
Identities = 170/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || || | ||||| ||||| || || ||||| || || || || ||| | ||
Sbjct 64007 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 63948
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || |||| |||| ||| || ||||| |||||||| || ||||| |||||
Sbjct 63947 GACACTATTGACAACGTCAAAAGTAAA-ATTCAAGATAAAGAAGGTATCCCTCCGGATCA 63889
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||| | ||||| ||||| || || || || || ||| |||| | |||| || || ||
Sbjct 63888 ACAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAA 63829
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||| ||||||||||| || || |||||||||||| || || | || ||
Sbjct 63828 CATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGACTGAGAGGTGG 63781
Score = 138 bits (152), Expect = 1e-27
Identities = 169/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || ||| | || || || || ||||| ||||| || || || || ||| | |
Sbjct 64235 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 64176
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || |||| ||| | ||| || |||||||| ||||| || ||||| |||||
Sbjct 64175 GACACTATCGACAACGTTAAGTCGAAA-ATTCAAGACAAGGAAGGTATTCCTCCAGATCA 64117
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|||| | ||||| |||||||| || || ||||| || |||| |||| ||||||||
Sbjct 64116 ACAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAA 64057
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|||||| || || || || | || ||||||||| ||||| | || ||
Sbjct 64056 CATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGG 64009
Score = 125 bits (138), Expect = 6e-24
Identities = 155/209 (74%), Gaps = 3/209 (1%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | || || | ||||||||||| || || | ||||| ||| | ||
Sbjct 64691 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 64632
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| || | || |||| ||| | ||| || |||||||| ||||| || ||||| |||||
Sbjct 64631 GATACCATCGACAACGTTAAGTCGAAA-ATTCAAGACAAGGAAGGTATCCCTCCAGATCA 64573
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||| | |||||||||||||| || ||||| || || |||| |||| ||||| ||
Sbjct 64572 ACANAGNTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAA 64513
Query 24883 CATTCAAAAGGAATCGACACTACA-CTTG 24910
|||||| ||||| || || |||| ||||
Sbjct 64512 CATTCAGAAGGAGTCCACCTTACATCTTG 64484
Score = 116 bits (128), Expect = 3e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || ||| | || || || || ||||| ||||| || || || || ||| | |
Sbjct 63779 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 63720
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || |||| ||| | ||| || |||||||| ||||| || ||||| || ||
Sbjct 63719 GACACTATTGACAACGTTAAGTCGAAA-ATTCAAGACAAGGAAGGTATTCCTCCAGACCA 63661
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||| | ||||| |||||||| || || || || ||| |||| |||| || || ||
Sbjct 63660 GCAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAA 63601
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||||||||| || || || ||| | || ||| | ||| | || ||
Sbjct 63600 TATTCAAAAGGAGTCCACTCTTCACCTTGTCTTGAGGTTGAGGGGTGG 63553
>seq9
Length=437830
Score = 109 bits (120), Expect = 5e-19
Identities = 146/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787
|| ||||| || || || | ||||| ||| | | ||||| | || | || || |
Sbjct 67722 ACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATTGACAATGTCAAGTCA 67781
Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847
||||| |||||||| ||||| || || || || |||||| | ||||||||||| || ||
Sbjct 67782 AAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAG 67841
Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907
|| |||| || |||| | |||| || || ||||||||||| ||||| || | |||
Sbjct 67842 CAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAAGAATCCACTTTGCAC 67901
Query 24908 TTGGTGTTGCGATTGCGCGGAGG 24930
|| || ||| ||||| | || ||
Sbjct 67902 TTAGTCTTGAGATTGAGAGGTGG 67924
>seq11
Length=665665
Score = 104 bits (114), Expect = 2e-17
Identities = 146/205 (71%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 24717 TTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAA 24776
|||| || | || ||||| || || || | ||||| ||| | | ||||| | || |
Sbjct 617528 TTAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATTGACA 617469
Query 24777 CGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCT 24836
|| || |||||||||||||| ||||| || || || || |||||| | |||||||
Sbjct 617468 ATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCT 617409
Query 24837 TTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAAT 24896
|||| || || || |||| || |||| | || || || ||||| ||||||||||
Sbjct 617408 TTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTATCTGACTACAACATCCAAAAGGAAT 617349
Query 24897 CGACACTACACTTGGTGTTGCGATT 24921
| || |||| ||||| ||| ||||
Sbjct 617348 CCACTTTACATTTGGTCTTGAGATT 617324
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449897504396760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |