Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671435.1_202016-06- 20] 17 sequences; 12,132,872 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq10 125 8e-24 >seq10 Length=745079 Score = 125 bits (138), Expect = 8e-24 Identities = 483/747 (65%), Gaps = 32/747 (4%) Strand=Plus/Minus Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849 |||||||||| |||||||| || |||| | ||||| ||||| || ||||| || | Sbjct 393022 CATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCTTACCGGC 392963 Query 92850 CAAAGATATCGAATTCACT---AGTGATTGGATTCTTGGCGTTATAATA---CTTTTCAC 92903 ||| || || | ||| | | || || || | | | || || || ||| | || Sbjct 392962 CAAGGAGAT-GTTTTCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCTTGTTAC 392904 Query 92904 CGATCAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCAC 92963 ||| | | ||| | ||| || || || || || | ||| || ||| || ||| Sbjct 392903 CGA---AAGCNACCAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGTCAG 392847 Query 92964 AATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAA--ATCTTTCT-CGATTA 93020 ||||| ||||| | | || |||| ||||| |||||| |||||| | | ||| Sbjct 392846 CGTTCATACCTAGCAAAGCAACTGGTAAGGCGTC---CAAGAAGTATCTTTGTTCAATTT 392790 Query 93021 CAACGGCTTCTTTCAAGATTTCTATTACTCTACTATT--TGG---TGGTTT-TTGTACGA 93074 | || || || | | |||| | || || || ||| |||||| || | | | Sbjct 392789 CCACAGCCTCGGTGACAATTTTT-----TCAACNATGGCTGGGTCTGGTTTGTTCTTCAA 392735 Query 93075 CATAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACT 93134 || | ||| ||||| ||||||||||| || ||||||||||||| | ||||| | Sbjct 392734 -ATGGGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATT 392676 Query 93135 CATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAA 93194 | ||| || |||||||| || | || |||| || || | ||| || || || |||| Sbjct 392675 CGTTGGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAA 392616 Query 93195 AACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAAT 93254 | ||| || ||||| | |||||| | || ||||| || || | | ||| |||| Sbjct 392615 AGGAACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACA 392556 Query 93255 TTGCGGAA--TTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGG 93312 ||| | | || |||||| |||||||||| ||||| || | || || Sbjct 392555 AGGCGTCAGCGTCTTG--NATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCTGG 392498 Query 93313 TAGTGTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATC 93372 | || | || || || || | | | || | || | | || ||||| ||||| Sbjct 392497 GATGGTGTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAAGTATC 392438 Query 93373 GATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAA 93432 ||| |||| || || ||||||| || | ||| || || |||||||| |||||||| Sbjct 392437 GATCAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAA 392378 Query 93433 ACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGAC 93492 || | || || | || || ||||| || || | || || | |||||||| || Sbjct 392377 ACTCTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAAC 392318 Query 93493 TATACCATCGGATGCTGCaaaaaaaGC 93519 ||||| || || || || ||||| || Sbjct 392317 AATACCGTCAGAAGCGGCGAAAAAGGC 392291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860681667080