Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671435.1_202016-06-
20] 17 sequences; 12,132,872 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq5 105 7e-18
seq9 84.2 2e-11
>seq5
Length=575931
Score = 105 bits (116), Expect = 7e-18
Identities = 287/437 (66%), Gaps = 7/437 (2%)
Strand=Plus/Plus
Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951
||| | || || ||||||| || || || || || || ||||| || |||||| ||
Sbjct 299530 GCCTCTCCAACGTTGTTCAATGCCGGTACTCCAAAACCTCAAATGTCCTCTTGTTTCTTG 299589
Query 93952 ATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011
| | | |||| ||||| ||| || |||| ||||| | | ||||| |||||
Sbjct 299590 GTTGCCATGAAGGAGGACTCTATCGAGGGGATTTACGACACCTTGAAGGAATGTGCTTTG 299649
Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071
|| || ||| || || || || || | | |||| || | ||| | | |||||
Sbjct 299650 ATTTCCAAAACTGCTGGTGGTATTGGTCTACATATCCATAACATTCGTTCAACTGGTTCT 299709
Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131
||||| ||||| || || || || ||||| | | |||||| | || || |||||
Sbjct 299710 TACATTGCTGGTACAAACGGTACTTCTAACGGTTTAATTCCTATGATTCGTGTTTTCAAT 299769
Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191
||| | || || || || |||||||||||| | || ||| | || || | ||
Sbjct 299770 AACACTGCCCGTTATGTTGACCAGGGTGGTAATAAAAGACCTGGTGCGTTTGCCCTTTAC 299829
Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251
|| || || ||||| || || | | ||| || || | | ||||||||||| ||
Sbjct 299830 CTGGAACCATGGCATGCTGATATATTTGATTTTATTGATATTAGGAAGAACCACGGTAAA 299889
Query 94252 GATCTGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATG 94308
|| ||| | | || ||||| | ||| ||||| ||| | || || ||||| |||
Sbjct 299890 GA---GGAAATTCGTGCAAGAGATTTGTTCCCTGCTCTATGGATTCCTGATCTTTTCATG 299946
Query 94309 AAACGCGTCG-AGAAAA 94324
|| || |||| ||||||
Sbjct 299947 AAGCGTGTCGAAGAAAA 299963
>seq9
Length=439020
Score = 84.2 bits (92), Expect = 2e-11
Identities = 208/316 (66%), Gaps = 0/316 (0%)
Strand=Plus/Minus
Query 93896 CCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGA 93955
|||| || | |||||||| || || || || || |||||||| |||||| | ||
Sbjct 239553 CCCCAACTTTATTCAACGCTGGTACGCCACATCCTCAAATGTCTTCATGTTTCTTAATTG 239494
Query 93956 CGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCT 94015
| | |||| ||||| ||| || |||| || | | || || ||||| | || |
Sbjct 239493 CCATGAAGGATGACTCTATCGAAGGTATTTATGATACTTTGAAAGAATGTGCTATGATTT 239434
Query 94016 CAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACA 94075
| ||| || || || | || | | || || || | ||| ||| ||||| || |
Sbjct 239433 CCAAAACTGCAGGTGGTGTTGGTCTTCATATCAACAACATCCGTTCCACAGGTTCTTATA 239374
Query 94076 TCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACG 94135
|| |||||||| || || || ||||| | | |||||| | || || ||||| ||
Sbjct 239373 TCGCTGGTACCAACGGTACTTCAAACGGGTTGATTCCTATGATTCGTGTTTTCAATAATA 239314
Query 94136 CGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCG 94195
| || || || ||||||||||||||| | ||| ||| | ||||| | | | |
Sbjct 239313 CTGCCCGTTATGTGGACCAGGGTGGTAACAAGAGACCTGGTGCNTTCGCCCTTTTCTTGG 239254
Query 94196 AGCCCTGGCACGCGGA 94211
|||| ||||| || ||
Sbjct 239253 AGCCATGGCATGCAGA 239238
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494723094871320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |