Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671565.1_202016-06- 20] 17 sequences; 12,117,350 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq12 138 1e-27 seq9 134 1e-26 seq11 122 8e-23 >seq12 Length=1076879 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||||||||||||||| |||| ||| | ||||| || || || Sbjct 64620 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 64561 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || || ||||| | ||| | |||| ||| ||||| ||||| || || || || || Sbjct 64560 GATACCATCGACAACGTTAAGTCGAAAATTCAA-GACAAGGAAGGTATCCCTCCAGATCA 64502 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| | | || |||||||| || || ||||||| | | | || || |||||||| Sbjct 64501 ACAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAA 64442 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||| || || ||||| ||||| | ||||||||||||||||| || Sbjct 64441 CATTCAGAAGGAGTCCACCTTACATCTTGTGCTAAGGCTAAGAGGTGG 64394 Score = 138 bits (152), Expect = 1e-27 Identities = 169/229 (74%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || |||||||| |||||||| | || || | ||||| || || ||| Sbjct 498360 ATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCTTCT 498419 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 |||||||| || || || ||| || ||| ||||| ||||| ||||||||||||| Sbjct 498420 GACACTATTGA--CAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACC 498477 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 |||| | | || ||||| || || ||||| ||||||| | | ||| || ||| |||| Sbjct 498478 AACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACA 498537 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 | || ||||| ||||| || ||||| || || | || | ||||| || Sbjct 498538 ACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 498586 Score = 129 bits (142), Expect = 5e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| |||||||||||||||||| ||||||| | || || || || || Sbjct 64392 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 64333 Query 25059 GACACTATCGAGTCAC-TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| ||||| | || | ||| |||||| ||||| ||||| || || || || || Sbjct 64332 GACACGATCGA-TAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCA 64274 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||| || | || |||||||| || || ||||||| | | | || || || ||||| Sbjct 64273 ACAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAA 64214 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || ||||| ||||| || || || || ||| | || | ||||| || Sbjct 64213 CATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 64166 Score = 104 bits (114), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || || ||| | || || || | || || | || || || || ||| Sbjct 63708 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCT 63649 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 |||||||| || | ||| | |||| ||| ||||| ||||| ||||| || ||||| Sbjct 63648 GACACTATTGACAACGTTAAGTCGAAAATTCAA-GACAAGGAAGGTATTCCTCCAGACCA 63590 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 || | | ||||||||||| || ||| ||||||||| | | || || || ||||| Sbjct 63589 GCAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAA 63530 Query 25178 TATTCAAAAAGAATCCACGCTACA 25201 ||||||||| || ||||| || || Sbjct 63529 TATTCAAAAGGAGTCCACTCTTCA 63506 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || || ||| | || || || | || || | || || || || || Sbjct 64164 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 64105 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 |||||||| || | ||| |||||| ||| ||||| ||||| ||||| || || || Sbjct 64104 GACACTATTGACAACGTCAAGTCAAAAATTCAA-GACAAGGAAGGTATTCCTCCAGATCA 64046 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| | | ||||||||||| || ||| | ||||| | | | || || ||||| || Sbjct 64045 ACAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAA 63986 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||| ||||| || ||| | ||||| ||| | || | ||||| || Sbjct 63985 CATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGG 63938 >seq9 Length=438457 Score = 134 bits (148), Expect = 1e-26 Identities = 165/221 (75%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 ||||| ||||||||||| ||||| ||||||| | ||||| || || ||||||||||| Sbjct 68374 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 68433 Query 25068 GAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGG 25124 || || || ||| |||| | ||| ||||| ||||| || |||||||||||||| | Sbjct 68434 GA--CAATGTCAAGTCAAAGATTCA-AGACAAGGAAGGTATCCCACCTGACCAACAAAGA 68490 Query 25125 ATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAA 25184 | || ||||| || || ||||| ||||| | | | || || || ||||| |||||| Sbjct 68491 TTGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAA 68550 Query 25185 AAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||||||||| | || ||||| | || | ||||| || Sbjct 68551 AAAGAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGG 68591 >seq11 Length=658926 Score = 122 bits (134), Expect = 8e-23 Identities = 160/220 (73%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 || || ||||||||||| ||||| ||||||| | ||||| || || |||||||| || Sbjct 617550 TTCGTTAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATT 617491 Query 25068 GAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGA 25125 || || || ||| || ||| ||||| ||||| || |||||||||||||| | Sbjct 617490 GA--CAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGAT 617433 Query 25126 TTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAA 25185 | || ||||| || || ||||| ||||| | | | ||| | || ||||| || |||| Sbjct 617432 TGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTATCTGACTACAACATCCAAA 617373 Query 25186 AAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 | |||||||| ||||||| || | || ||||||| || Sbjct 617372 AGGAATCCACTTTACATTTGGTCTTGAGATTAAGAGGTGG 617333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327910219855