Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671565.1_202016-06-
20] 17 sequences; 12,117,350 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq12 208 2e-48
seq9 158 3e-33
seq11 150 4e-31
>seq12
Length=1076879
Score = 208 bits (230), Expect = 2e-48
Identities = 175/215 (81%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 194926 CTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCA 194985
||||| |||||||||||||||||||| |||||||||||||| || | || ||||| |||
Sbjct 63494 CTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCA 63553
Query 194986 TCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTG 195045
||||| || |||||||| || || || | || ||| |||||||||||||| ||||| |||
Sbjct 63554 TCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTG 63613
Query 195046 TCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACC 195105
||||||||||| ||| ||||| ||||| ||||| ||| ||| || || ||||| |
Sbjct 63614 TCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATA 63673
Query 195106 GTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||||| ||||| | |||||| ||||| | ||||||
Sbjct 63674 GTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 63708
Score = 179 bits (198), Expect = 8e-40
Identities = 173/222 (78%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | |||||| || | || | || |||||||| ||||| || ||||| | || ||
Sbjct 63943 TCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGT 64002
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| || ||||| || |||||||| || || || | || |||||| ||||||||||| ||
Sbjct 64003 TCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGAATACC 64062
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| ||||||||||||||| ||||||||| ||||| ||||| ||| ||| || || ||
Sbjct 64063 TTCCTTGTCTTGAATTTTTGACTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAG 64122
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||| | ||||| ||||| | |||||| ||||| | ||||||
Sbjct 64123 GGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 64164
Score = 161 bits (178), Expect = 2e-34
Identities = 169/222 (76%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| || || | ||||| || | |||||||| || ||||| |||||||| | || ||
Sbjct 64399 TCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGT 64458
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| || ||||| ||||||||||| || ||||| | || |||||| |||||||| || ||
Sbjct 64459 TCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACC 64518
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| |||||||||||||| ||| ||||| || ||||| || ||| ||| ||||| |
Sbjct 64519 TTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAA 64578
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| | || || || |||||||| || ||||| | |||||
Sbjct 64579 TGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 64620
Score = 134 bits (148), Expect = 3e-26
Identities = 165/223 (74%), Gaps = 2/223 (1%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977
||| | |||||| || | ||||||||| || || ||||| || ||||| || | |||| |
Sbjct 64171 TCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAG-G 64229
Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037
|||| || ||||| ||||||||||| || ||||| | | ||||| |||||||| || |
Sbjct 64230 TTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATAC 64289
Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097
|||| ||||| || ||||| ||| ||||| || || ||||| || ||| || || |
Sbjct 64290 CTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTA 64349
Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| | || || || |||||||| || || || | |||||
Sbjct 64350 AAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 64392
>seq9
Length=438457
Score = 158 bits (174), Expect = 3e-33
Identities = 165/214 (77%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977
||| | |||||| || | ||| | |||||| ||||||||||| ||||| || | |||| |
Sbjct 68586 TCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAG-G 68528
Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037
|||| || ||||| | |||||||| || ||||| | || ||||||||| || || || |
Sbjct 68527 TTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATAC 68468
Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097
|||| ||||||||||| ||| |||||| || ||||| ||||| ||| ||| ||||| |
Sbjct 68467 CTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCA 68408
Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131
|| | ||||| || |||||||| || || ||
Sbjct 68407 AAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 68374
>seq11
Length=658926
Score = 150 bits (166), Expect = 4e-31
Identities = 161/213 (76%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | |||||| || | || | |||||| || ||||| || ||||| || | |||||
Sbjct 617338 TCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGT 617397
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| || ||||| | |||||||| || ||||| | || ||||||||| || || || ||
Sbjct 617398 TCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACC 617457
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| |||||||| || || |||||| || ||||||||||| ||| ||| ||||| |
Sbjct 617458 TTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAA 617517
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131
|| | ||||| || |||||||| || |||||
Sbjct 617518 AGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 617550
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109481358341039
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |