Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671595.1_202016-06- 20] 17 sequences; 12,118,701 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq9 205 2e-47 seq5 197 4e-45 seq15 131 4e-25 >seq9 Length=438235 Score = 205 bits (226), Expect = 2e-47 Identities = 1070/1681 (64%), Gaps = 49/1681 (3%) Strand=Plus/Minus Query 363364 TATGAGAAGGATCTCGAGTATGATATTTTCGGATATAAGACGATGGAGAAATCCTACCTA 363423 || || | |||| || ||||| |||||||| ||||| ||||| || ||| | Sbjct 239212 TACGATAGGGATTTCCAGTATACGTATTTCGGATTCAAGACACTGGAGCGTTCGTACTTG 239153 Query 363424 TCTCGTATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATT 363483 | | || ||||| | | ||||| || |||||| || |||||||||| || | Sbjct 239152 CTAAGACTGAACGGTGAAGTGGCAGAACGTCCTCAGCATTTGGTAATGCGTGTGGCGCTA 239093 Query 363484 GGTATCCATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGT 363543 ||||||||| | ||| | || | | | | | || ||||| || | || | Sbjct 239092 GGTATCCATGGTAGCGATATCGAATCTGTGCTGAAGACTTATAA--TTTGATGTCGTTAA 239035 Query 363544 G-TA-TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGT 363601 | || ||||| ||||| | ||||| | | ||| ||||| || | |||| || |||| Sbjct 239034 GATACTTCACTCACGCTTCCCCAACTTTATTCAACGCTGGTACGCCACATCCTCAAATGT 238975 Query 363602 CTTCTTGCTTTCTTC-TAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTT 363660 |||| || |||||| | |||||||| || || ||||| ||||| | ||| || | Sbjct 238974 CTTCATG-TTTCTTAATTGCCATGAAGGATGACTCTATCGAAGGTATTTATGATACTTTG 238916 Query 363661 AAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTT 363720 || | |||||| | |||||||| | |||||| || ||||| | ||| |||| | Sbjct 238915 AAAGAATGTGCTATGATTTCCAAAACTGCAGGTGGTGTTGGTCTTCATATCAACAACATC 238856 Query 363721 CGTGC-ACAGAACAGTTACATTCGC-GGCACAGGGGGATACT-CGAATGGGCTGGTTCCC 363777 ||| | |||| ||| || ||| || || || |||| | || ||| || |||| Sbjct 238855 CGTTCCACAGGTTC-TTATAT-CGCTGGTACCAACGG-TACTTCAAACGGGTTGATTCCT 238799 Query 363778 ATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAA 363837 ||| ||||||| || | |||||||| | || || ||||||||||| ||| | Sbjct 238798 ATGATTCGTGTTTTCAATAATACTGCCCGTTATGTGGACCAGGGTGGTAACAAGAGACCT 238739 Query 363838 GGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTC 363897 || || || || | | | ||||| ||||| ||||| || || ||| | || || Sbjct 238738 GGTGCTTTCGCCCTTTTCTTGGAGCCATGGCATGCAGATATCTTCGACTTTGTCGATATC 238679 Query 363898 CGGAAAAACACG-GGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGT 363956 | |||||||| || || || ||| | |||||| | ||| ||||| ||| || ||| | Sbjct 238678 AG-AAAAACACATGGTAAGGAAGAAATTCGTGCAAGAGATTTGTTCCCTGCTCTATGGAT 238620 Query 363957 TTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACA 364016 |||| | ||| ||||| || || | | || | | |||| | | |||| || || Sbjct 238619 CCCTGATCTTTTCATGAAACGTGTTCAAGAAGATGGGCCTTGGACTTTGTTTTCGCC-CA 238561 Query 364017 CGAATGTCC-AGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGT 364075 || || |||| | ||||| |||||||| || | || | ||||| | Sbjct 238560 GTGCTGCCCCAGGTTTAGATGATGTGTGGGGTGATGAATTTGAAGAACTATATACTCGTT 238501 Query 364076 ATGAATCGGAGGGAAAGGC-TCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATC 364134 | ||| || ||| | | | |||| |||||| || || ||| | |||| |||||| Sbjct 238500 ACGAA----AGAGAAGGTCGTGGTAAAACAATTAAAGCCCAAAAGTTGTGGTATGCCATT 238445 Query 364135 ATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGC 364194 || | |||||| || ||||| ||||| | ||| | || || || | || ||| | Sbjct 238444 TTGCAAGCGCAGACAGAAACAGGTACACCTTTCATGGTTTATAAGGACGCATGTAACAGG 238385 Query 364195 AAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGC-AACCTATGTACCGAGATTAT 364253 ||| | ||||| ||| || | ||||| || || | | || ||||| || || | Sbjct 238384 AAGACAAACCAACAGAACTTAGGTACTAT-CAAATCATCTAATTTATGTTGTGAAATCGT 238326 Query 364254 TGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGC 364313 ||||| || | || || || ||||| || ||||| | || || || || || || || Sbjct 238325 CGAATATTCCTCCCCGGATGAAACTGCAGTTTGTAATTTAGCTTCTATTGCCCTACCAGC 238266 Query 364314 GTTTGT---------AAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAAC--- 364361 || || | ||||||||| || | | || | | || | || Sbjct 238265 ATTCGTTGAGGTTTCAGAAGATGGTAAAACTGCAAGCTATAATTTCGA-GAGATTACACG 238207 Query 364362 ------CTA---TCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCC 364412 ||| |||| |||| ||| | ||| ||||||||| ||||| ||||| Sbjct 238206 AGATTGCTAAAGTCAT--TACTCACAACTTGAACAGAGTTATCGACCGTAATTACTATCC 238149 Query 364413 AATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGG 364472 | |||| || || ||| |||||| ||| | || |||| ||||||||| ||||| Sbjct 238148 AGTTCCCGAGGCTAGAAATTCAAATATGAAGCATAGACCTATTGCTCTTGGTGTCCAGGG 238089 Query 364473 CCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCT 364532 | || || || ||||||| | | | ||||| ||| | |||| ||| Sbjct 238088 TTTGGCCGATACTTATATGATGTTGCGTCTACCCTTTGAATCGGAAGTAGCTCAAACTCT 238029 Query 364533 AAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGC 364592 ||| || | ||||| ||||| || || ||| | | || || ||||| ||||| Sbjct 238028 AAACAAACAAATCTTCGAAACTATTTACCATGCTACTCTTGAAGCCTCCTGTGAATTGGC 237969 Query 364593 A-AAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCC 364651 |||| |||| ||| || ||||||| ||| || || || ||| |||| | || | Sbjct 237968 CCAAAAAGAAGGTAAA-TATTCTACTTTTGAAGGTTCTCCAGCTTCTAAGGGTATTTTAC 237910 Query 364652 AGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCA 364711 | || ||| | ||||| | | |||| || | ||| | ||||| || || | Sbjct 237909 AATTCGATATGTGGAACGCTAAACCATTTGGCATGTGGGATTGGGAAACCTTAAGAAAGG 237850 Query 364712 ACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTA 364771 || || || ||||| | ||||| | || || || ||||| || || || | Sbjct 237849 ACATTGTTAAACATGGGTTAAGAAACTCTTTGACTATGGCACCAATGCCAACCGCCTCAA 237790 Query 364772 CTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCAC 364831 || | || || || || | || || ||||||||||| | || || | || || | Sbjct 237789 CTTCCCAAATTCTTGGTTATAATGAATGCTTCGAACCAGTGACCTCAAACATGTACTCTC 237730 Query 364832 GCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCG 364891 | || || || || || ||||| | || |||||| || || | ||| | || Sbjct 237729 GTCGTGTCCTGTCTGGTGAATTCCAAGTTGTTAATCCATATTTACTACGTGATTTAGTCG 237670 Query 364892 ACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGC 364951 ||| || | |||| ||| || ||||| | ||| | || | ||||||||| | | Sbjct 237669 ACCTGGGTATTTGGGATGATAGTATGAAACAATATCTAATTACACAAAATGGTTCTATTC 237610 Query 364952 AGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTT 365011 | | | ||| | ||| |||| ||||| | ||||||||||| |||||||| | Sbjct 237609 AAGGCTTACCAAATGTGCCACAAGAATTGAAGGAACTATACAAAACCGTCTGGGAAATCT 237550 Query 365012 C 365012 | Sbjct 237549 C 237549 >seq5 Length=571783 Score = 197 bits (218), Expect = 4e-45 Identities = 698/1076 (65%), Gaps = 57/1076 (5%) Strand=Plus/Plus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 || || |||||| | ||||| ||| |||||| || |||| || || || ||||| ||| Sbjct 294986 TTTACTCACGCCTCTCCAACGTTGTTCAATGCCGGTACTCCAAAACCTCAAATGTCCTCT 295045 Query 363607 TGCTTTCTTC-TAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAA 363665 || |||||| | |||||||| || || |||||||| || | ||||| | ||| | Sbjct 295046 TG-TTTCTTGGTTGCCATGAAGGAGGACTCTATCGAGGGGATTTACGACACCTTGAAGGA 295104 Query 363666 TTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC 363725 |||||| | |||||||| | ||| || || |||||| || ||||| || ||||| | Sbjct 295105 ATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGTCTACATATCCATAACATTCGTTC 295164 Query 363726 ACAGAACAG----TTACATTCGCGGCACAGGGGGATACT-CGAATGGGCTGGTTCCCATG 363780 | || | ||||||| || ||| || |||| | || || | |||| ||| Sbjct 295165 A----ACTGGTTCTTACATTGCTGGTACAAACGG-TACTTCTAACGGTTTAATTCCTATG 295219 Query 363781 CTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGG--AGGAAAGCGCAAAG 363838 ||||||| || | || ||||| | || || ||||||||||| | |||| | | Sbjct 295220 ATTCGTGTTTTCAATAACACTGCCCGTTATGTTGACCAGGGTGGTAATAAAAGACC--TG 295277 Query 363839 GGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCC 363898 | |||||||| | || || || || ||||| ||||| ||||| ||| |||| | Sbjct 295278 GTGCGTTTGCCCTTTACCTGGAACCATGGCATGCTGATATATTTGATTTTATTGATATTA 295337 Query 363899 GGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTT 363958 |||| ||| || ||||||||| | |||||| | ||| ||||| ||| || ||| || Sbjct 295338 GGAAGAACCACGGTAAAGAGGAAATTCGTGCAAGAGATTTGTTCCCTGCTCTATGGATTC 295397 Query 363959 CTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACG 364018 |||| | ||| |||||||| || || | | | || ||| || | || | ||| Sbjct 295398 CTGATCTTTTCATGAAGCGTGTCGAAGAAAATGGGACCTGGACATTATTCTCTCCAACAT 295457 Query 364019 AATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATG 364078 | ||| ||| | |||| | |||||||| | || |||||||| || | Sbjct 295458 CAGCTCCTGGTTTAAGCGATTGTTACGGTGACGAGTTTGAGGCTCTATATACCCGCTACG 295517 Query 364079 AATCGGAGGGAAAGGC-TCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATG 364137 | || ||| | | | ||||||| || || || || |||||| | |||| || Sbjct 295518 A----GAAAGAAGGTCGTGGTAAGACTATCAAAGCCCAAAAATTATGGTATTCCATTTTG 295573 Query 364138 GATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAG 364197 || | || | ||| || || ||||| | | | ||||| ||| | || ||| | || Sbjct 295574 GAAGCTCAAACTGAAACTGGTACACCTTTCGTTGTTTACAAGGATGCTTGTAACAGAAAA 295633 Query 364198 TCCAACCAGCAGCACCTTGGT----ACAATTCAGCAGAGCAACCTATGTACCGAGATTAT 364253 || || || | || | ||| ||| ||| || ||| |||| || ||| | Sbjct 295634 TCTAATCAAAAAAACTTAGGTGTCATCAAGTCATCA----AACTTATGCTGTGAAATTGT 295689 Query 364254 TGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGC 364313 ||||||| | ||||| || || ||||| || |||||| | || || | || | || || Sbjct 295690 TGAATACTCAGCTCCAGATGAAACTGCTGTTTGTAACTTGGCTTCCGTTGCCTTACCAGC 295749 Query 364314 GT---TTGTAA------AAGATGGT---ACTTTTGACCAC---CAGCATC-------TTT 364351 | ||| || | |||||| |||| |||| || | || | Sbjct 295750 ATTCATTGAAACTTCTGAGGATGGTAAGACTT----CCACATACAACTTCAAAAAATTAC 295805 Query 364352 ATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATC 364411 |||| | | | || |||| | ||| | ||| || || || ||||| || | Sbjct 295806 ATGAAATTGCTAAAGTTGTTACTCGTAATTTAAACAGAGTCATTGATCGTAATTACTACC 295865 Query 364412 CAATTCCTGAAGCCGAG-CGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAG 364470 | || |||| |||| || |||||| | ||| | || |||| | | ||||| || Sbjct 295866 CTGTTGAAGAAG-CGAGAAAATCCAATATGAGACATAGACCAATTGCTTTGGGTGTTCAA 295924 Query 364471 GGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTT 364530 || ||||||||| ||| ||| || | || |||||||||| || || ||| | Sbjct 295925 GGTCTCGCTGACACTTTCATGCTGTTACGTTTGCCATTTGATTCTGAGGAAGCCCGTTTG 295984 Query 364531 CTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGA 364586 ||||||| | ||||||||||| || ||| |||| | ||| ||||| ||||| Sbjct 295985 CTAAATATCCAAATCTTTGAAACTATTTATCATGCCTCCATGGAAGCTTCTTGTGA 296040 >seq15 Length=1079318 Score = 131 bits (144), Expect = 4e-25 Identities = 341/515 (66%), Gaps = 34/515 (7%) Strand=Plus/Minus Query 111419 TGTAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTC-G 111477 ||| || |||||||| || |||||||| ||||| | | ||||| || ||| || | Sbjct 455706 TGTTAAGATTTGGGACGGTAATGGATCTCGTGAATATTTAGATA-AGATGGGGTTCAAAG 455648 Query 111478 ACAACGAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAG 111537 | | ||| ||| ||||| || || ||||| |||||||||||| | || |||||||| Sbjct 455647 ATAGGAAAGTAGGAGATCTGGGGCCCGTTTATGGATTTCAATGGAGGCATTTTGGTGCTA 455588 Query 111538 ACTACAAAACCATGC-ACGACTCATATGATTCACAGGGAACTGATCAATTACAGAATGTC 111596 | ||||| || ||| | ||| ||| | ||| || | ||||||||| | | || Sbjct 455587 AATACAAGACG-TGCGATGACGACTATACTGGACAAGGTATTGATCAATTGAAACAGGTT 455529 Query 111597 ATTGATCAAATTAAGAACAA-CCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCC 111655 ||| || || | |||| || ||| || | | | || ||||||||||| |||||||| Sbjct 455528 ATTCATAAACTAAAGACAAATCCCTACGA-TAGAAGAATCATTATGAGTGCCTGGAACCC 455470 Query 111656 AAATGCATTGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATG---- 111711 | || || || |||||||| | |||||||| ||| || | | ||||| |||| Sbjct 455469 AGCTGATTTTGACAAAATGGCTTTGCCACCATGCCATATTTTTTCACAGTTCTATGTCAG 455410 Query 111712 --TACACGACG--------GGAT-------------GCTTTCATGCCAAATGTATCAGCG 111748 | | | | | |||| ||||||||| | |||| || || Sbjct 455409 TTTCCCCAAAGAAGGAGAAGGATCCGGTAAGCCCCGCCTTTCATGCTTATTGTACCAACG 455350 Query 111749 ATCTGCTGATATTGGTCTTGGTGTTCCGTTTAATATTGCAAGTTACGCACTACTTACTTG 111808 ||| |||||| || | || || || ||||| |||||| || || || | ||| | Sbjct 455349 TTCTTGTGATATGGGGTTGGGAGTACCATTTAACATTGCATCATATGCTTTATTGACTAG 455290 Query 111809 CTTAATCGCTCATTTTACAAATCTCAAACCGGGTGAATTCATTCACGTTATCGGAGATGC 111868 | || ||| | || | | | || ||||| |||||||| | | || ||||| Sbjct 455289 AATGATTGCTAAAGTTGTCGACATGGAGCCAGGTGAGTTCATTCATACTTTGGGGGATGC 455230 Query 111869 GCATGTTTACACAAACCACATTGATGCACTTAAAA 111903 |||||||| | | ||||||||||||| ||| ||| Sbjct 455229 ACATGTTTATAAAGACCACATTGATGC-CTTGAAA 455196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353316113294