Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671745.1_202016-06- 20] 17 sequences; 12,112,976 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq12 179 7e-40 seq11 165 2e-35 seq9 161 2e-34 >seq12 Length=1077135 Score = 179 bits (198), Expect = 7e-40 Identities = 172/218 (79%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313 |||| |||| |||||||| || || ||||| ||||| || || || || || ||||||| Sbjct 64752 CAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTA 64811 Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373 |||||| ||||| || || | ||||||||| || || || || |||||||||||||||| Sbjct 64812 GCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAA 64871 Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433 | || | ||| ||| |||||||| || | ||||| |||||||| || |||||||| | Sbjct 64872 TTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTAC 64931 Query 68434 CCGTGAGGGTCTTGACGAATATCTGCATTATGCTATTA 68471 | || | ||||||||||| |||||||| || |||||| Sbjct 64932 CGGTCAAAGTCTTGACGAAAATCTGCATAAT-CTATTA 64968 Score = 178 bits (196), Expect = 2e-39 Identities = 167/213 (78%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| ||||||||||| || || || ||||||||||| || ||||| | || || ||||| Sbjct 498911 CAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATC 498852 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || ||||| || || || || | |||||||||||| |||||||| ||||||||||| Sbjct 498851 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTC 498792 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| ||||| | |||||| || || ||||| | ||||| ||||||| ||| || || Sbjct 498791 TTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATAGT 498732 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | ||||||||||| || ||||| Sbjct 498731 CTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 498699 Score = 159 bits (176), Expect = 6e-34 Identities = 163/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| ||||| || | ||| |||||||| || ||||||||||| || || || || || || Sbjct 64291 CAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTC 64350 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| | ||||| ||||| || || | ||||||||| || || ||||| ||||||||||| Sbjct 64351 TTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTC 64410 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 |||||| || | ||| ||| ||||| ||||| | ||||| || || | ||| || || Sbjct 64411 TTGAATTTTCGACTTAACGTTGTCGATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGT 64470 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || || |||||||| || || ||||| Sbjct 64471 CTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 64503 Score = 150 bits (166), Expect = 3e-31 Identities = 161/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| || | ||| || |||||||| ||||| || || || || || || || || ||||| Sbjct 63835 CAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATC 63894 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||||| ||||| ||||| || || | |||||| ||||| || ||||| ||||||||||| Sbjct 63895 TTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTC 63954 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 |||||| || | ||| ||| || || ||||| | ||||| || || | ||| || || Sbjct 63955 TTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGT 64014 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || || |||||||| || || ||||| Sbjct 64015 CTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 64047 Score = 145 bits (160), Expect = 1e-29 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| || || || || ||||||||||| || || || | || || || || Sbjct 64519 CAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTC 64578 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||||| |||||| ||||| || || | || ||||| || || || || ||||||||||| Sbjct 64579 TTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTC 64638 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 || || || | ||| ||| ||||| ||||| | ||||| || || || |||||||| Sbjct 64639 CTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGT 64698 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||| || || | ||||| || || |||||||| Sbjct 64699 TTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 64731 Score = 132 bits (146), Expect = 9e-26 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| || || || || ||||||||||| || || || | || || ||||| Sbjct 64063 CAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATC 64122 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||||| ||||| || || || || | ||| ||||| || || || || ||||| || || Sbjct 64123 TTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATC 64182 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||||||||| |||||| || || ||||| | ||||| || || | ||| || || Sbjct 64183 TTGAATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGT 64242 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || || || |||||||| || ||||| Sbjct 64243 CTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 64275 >seq11 Length=665400 Score = 165 bits (182), Expect = 2e-35 Identities = 159/204 (78%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| ||||| |||| ||||| || ||||||||||| || || || || || || || || Sbjct 616980 CAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACCGTC 617039 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || ||||| || || || || | |||||||||||| ||||| || ||||||||||| Sbjct 617040 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTC 617099 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| ||||| | |||||| || |||||||| | ||||| |||||||| |||||||| Sbjct 617100 TTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGATGGT 617159 Query 68429 TTTTCCCGTGAGGGTCTTGACGAA 68452 || || || | ||||| ||||| Sbjct 617160 CTTACCAGTCAAAGTCTTAACGAA 617183 >seq9 Length=431396 Score = 161 bits (178), Expect = 2e-34 Identities = 158/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| || ||||| | ||||| |||||||| ||||| || || || | || || || || Sbjct 61440 CAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACCGTC 61381 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || ||||| || || || || | |||||||||||| ||||| || ||||||||||| Sbjct 61380 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTC 61321 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||||||||||| |||||| || || ||||| | ||||| |||||||| |||||||| Sbjct 61320 TTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGT 61261 Query 68429 TTTTCCCGTGAGGGTCTTGACGAA 68452 || || || | |||||||| || Sbjct 61260 CTTACCAGTCAAAGTCTTGACAAA 61237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921622204155240