Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671775.1_202016-06-
20] 17 sequences; 12,124,762 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq12 122 6e-23
>seq12
Length=1077857
Score = 122 bits (134), Expect = 6e-23
Identities = 168/232 (72%), Gaps = 10/232 (4%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| ||||| || || || || || || || || || || || || ||||| || |
Sbjct 64738 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 64679
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|||||| | || || |||| | |||| || ||||| |||||| | || ||||||||
Sbjct 64678 GACACTATCGACAACGTTAAGTCGAAAA-TTCAAGACAAGGAAGGTATTCCTCCAGATCA 64620
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGAC----GAACGCACTTTAGGCGATT 23785
||| | || || |||||||| || |||||||||||| |||||| | | ||||
Sbjct 64619 ACAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCT----GATT 64564
Query 23786 ACAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
| ||||| || |||||||| || || ||||| || || || ||| |||| ||
Sbjct 64563 ATAACATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGG 64512
Score = 114 bits (126), Expect = 9e-21
Identities = 166/232 (72%), Gaps = 10/232 (4%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || || | || || ||||| || || | |||||||| || |
Sbjct 65194 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 65135
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| || | || || |||| | |||| || ||||| |||||| | || ||||||||
Sbjct 65134 GATACCATCGACAACGTTAAGTCGAAAA-TTCANGACAAGGAAGGTATCCCTCCAGATCA 65076
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACG----AACGCACTTTAGGCGATT 23785
||| | || || |||||||| || || || ||||||| ||||| | | ||||
Sbjct 65075 ACANAGNTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCT----GATT 65020
Query 23786 ACAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
||||||| || || |||||||| |||||| | || ||||| | |||| ||
Sbjct 65019 ACAACATTCAGAAGGAGTCCACCTTACATCTTGTGCTAAGGCTAAGAGGTGG 64968
Score = 111 bits (122), Expect = 1e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || ||||| || | || || ||||| |||||| | || ||||| ||| |
Sbjct 64966 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 64907
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || || |||| | |||| | ||||| |||||| | || ||||||||
Sbjct 64906 GACACGATCGATAACGTTAAGTCGAAAA-TCCAGGACAAGGAAGGTATCCCTCCAGATCA 64848
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||| | || || |||||||| || || || ||||||| | || || || |||||
Sbjct 64847 ACAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAA 64788
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
||| ||||| || || || | || || || || || ||| |||| ||
Sbjct 64787 CATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 64740
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338009529968636
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |